Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 MIR548K-201ENST00000408406 116 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 RNU2-9P-201ENST00000410194 145 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AC017079.2-201ENST00000416102 485 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 PGBD4P6-201ENST00000421501 610 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 GPR143P-201ENST00000434155 205 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 DYNLT3P2-201ENST00000442517 295 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 TXNP6-201ENST00000510190 310 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 NARSP2-201ENST00000518524 679 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AC022080.3-201ENST00000544433 482 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AC008011.1-201ENST00000545989 227 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AC006557.5-201ENST00000603126 811 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AL596275.2-204ENST00000641628 552 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 AL596275.2-206ENST00000641957 626 ntBASIC5.5□□□□□ -1.53
COL17A1Q9UMD9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AC007685.1-201ENST00000329806 452 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 RNU6-108P-201ENST00000365558 107 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 RHOT1P2-201ENST00000366423 333 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 RNU6-1027P-201ENST00000383998 107 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 SNORA51.6-201ENST00000384151 125 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 DSTNP4-201ENST00000399472 474 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 RNA5SP306-201ENST00000411087 107 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AC019097.1-201ENST00000424783 735 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AC079781.2-201ENST00000446424 169 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 U3.44-201ENST00000458938 192 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 Y_RNA.673-201ENST00000516306 88 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AP003385.6-201ENST00000531603 374 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 MIR3167-201ENST00000579623 85 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 MIR7106-201ENST00000612419 65 ntBASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL17A1Q9UMD9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 RNU6-1290P-201ENST00000362957 109 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 RNU6-1040P-201ENST00000383974 107 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 Y_RNA.462-201ENST00000384268 102 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AL357075.1-201ENST00000404107 726 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 RNU2-38P-201ENST00000410856 79 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC074085.1-201ENST00000413598 418 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AL133396.1-201ENST00000432048 687 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 RPS15AP9-201ENST00000439856 381 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC005912.1-201ENST00000495392 255 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 HMGB1P35-201ENST00000503360 598 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 TMEM248P1-201ENST00000510579 951 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 RNU6-273P-201ENST00000516937 96 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AL353997.4-201ENST00000586196 166 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AF038458.1-201ENST00000588406 262 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC125232.2-201ENST00000592457 143 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 HSPE1P14-201ENST00000605812 302 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AC007998.5-201ENST00000622938 237 ntBASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL17A1Q9UMD9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 Y_RNA.80-201ENST00000362996 102 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 SNORA5B-201ENST00000363786 132 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 RNU6-450P-201ENST00000364654 107 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 HMGB1P15-201ENST00000453854 435 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 MTND4LP30-201ENST00000454092 297 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 RNU7-63P-201ENST00000459054 62 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AP000893.1-201ENST00000474462 794 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 HMGB1P21-201ENST00000502313 581 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 RN7SKP24-201ENST00000515888 284 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 RNA5SP154-201ENST00000516193 111 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AP003072.2-201ENST00000527756 676 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms