Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-1332P-201ENST00000516666 104 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 Y_RNA.718-201ENST00000517110 102 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AP005639.2-201ENST00000527592 928 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AC004024.1-201ENST00000549244 247 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 IMMP1LP2-201ENST00000552954 492 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AL157871.3-201ENST00000557231 293 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 MIR5690-201ENST00000583739 73 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AC106900.2-201ENST00000604994 317 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 FAM157A-202ENST00000615155 405 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AC090132.2-201ENST00000615881 347 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AC010378.1-201ENST00000619270 362 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 AC034229.5-201ENST00000624258 185 ntBASIC4.78□□□□□ -1.64
DDX41Q9UJV9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DDX41Q9UJV9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 MARK2P15-201ENST00000432204 2186 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 RNU6-266P-201ENST00000364225 107 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 SNORD66.1-201ENST00000391230 76 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 MTCYBP4-201ENST00000401524 249 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AL391417.1-201ENST00000404100 426 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AL445189.1-201ENST00000405722 338 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 RNU2-33P-201ENST00000410344 192 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 MIR1911-201ENST00000410783 80 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 RNU6-370P-201ENST00000411008 104 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AL359672.1-201ENST00000442302 409 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC009237.8-201ENST00000445492 379 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC117503.1-201ENST00000472241 394 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 RPL21P129-201ENST00000491732 478 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC009901.1-201ENST00000506703 541 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC006064.5-201ENST00000541782 248 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC026371.1-201ENST00000551867 419 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AL031601.2-202ENST00000622650 282 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 MTND4LP32-201ENST00000636111 270 ntBASIC4.77□□□□□ -1.65
DDX41Q9UJV9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
DDX41Q9UJV9 AC027290.2-201ENST00000623210 18662 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RNU6-593P-201ENST00000364716 112 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 MIR23B-201ENST00000384832 97 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 snosnR66.1-201ENST00000391095 99 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RNY4P36-201ENST00000391116 96 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RNU6-628P-201ENST00000410675 107 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AL158156.1-201ENST00000422509 473 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RNU7-138P-201ENST00000459479 64 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RPL7P5-201ENST00000471472 736 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 SUMO2P6-201ENST00000505273 288 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RNA5SP468-201ENST00000516782 93 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC073539.2-201ENST00000597113 165 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC002044.1-201ENST00000606707 158 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AL355365.1-201ENST00000616480 294 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 RLIMP1-201ENST00000339626 1680 ntBASIC4.76□□□□□ -1.65
DDX41Q9UJV9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX41Q9UJV9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AL133412.1-201ENST00000380194 2992 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 Y_RNA.579-201ENST00000390939 94 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 RNA5SP129-201ENST00000410276 118 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 PIGFP3-201ENST00000441918 722 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 RPS24P13-201ENST00000442520 397 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms