Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC005094.1-201ENST00000440420 368 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 FAM103A2P-201ENST00000444122 354 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AL031313.1-201ENST00000448435 256 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 EXOSC3P1-201ENST00000448649 500 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 snoU109.3-201ENST00000459477 145 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC106872.3-201ENST00000495104 446 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC234781.5-201ENST00000508429 271 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 SNORD19.2-201ENST00000516978 73 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC021739.1-201ENST00000559631 174 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC107294.1-201ENST00000609524 467 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC135507.2-201ENST00000612443 309 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 MIR6817-201ENST00000615588 66 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC009159.1-201ENST00000618386 642 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 MTND5P30-201ENST00000452896 1731 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AP000776.1-201ENST00000530032 1663 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 UBE2L2-201ENST00000254302 429 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 RNU6-512P-201ENST00000364438 103 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 SNORA67.4-201ENST00000384688 142 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AL021407.1-201ENST00000404531 386 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 RNA5SP184-201ENST00000411071 108 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 CYCSP48-201ENST00000417124 323 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 MORF4L1P6-201ENST00000418771 268 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AL109913.1-201ENST00000421173 514 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 COTL1P1-201ENST00000422309 375 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 NUP35P1-201ENST00000422734 947 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC104651.1-201ENST00000427559 735 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 TXNL1P1-201ENST00000429528 554 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 HMGB1P27-201ENST00000431429 603 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AL161651.1-201ENST00000440882 223 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 RPS3AP12-201ENST00000443616 753 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 HMGN2P10-201ENST00000448085 265 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 MTATP6P7-201ENST00000453315 681 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 RPS3P1-201ENST00000456781 192 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC006199.1-201ENST00000548728 219 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC022662.1-201ENST00000580252 331 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 MIR4765-201ENST00000585007 77 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC005261.5-201ENST00000596280 355 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC091057.3-201ENST00000602684 733 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC068790.3-201ENST00000602988 553 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 RPP40P2-201ENST00000603596 712 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC080013.3-201ENST00000606839 578 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC069294.1-201ENST00000608397 350 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC011939.3-201ENST00000613686 466 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
CLN6Q9NWW5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLN6Q9NWW5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLN6Q9NWW5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLN6Q9NWW5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2□□□□□ -2.09
CLN6Q9NWW5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLN6Q9NWW5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 MIR147B-201ENST00000390185 80 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLN6Q9NWW5 HMGB3P2-201ENST00000411913 584 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 NANOGP5-201ENST00000424456 877 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AC018634.1-201ENST00000437554 401 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms