Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 Y_RNA.263-201ENST00000364659 114 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 RNU6-741P-201ENST00000383889 107 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 Y_RNA.399-201ENST00000383955 105 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 Y_RNA.530-201ENST00000384587 101 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AL138878.1-201ENST00000405131 347 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 RNA5SP111-201ENST00000411386 101 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 CYCSP35-201ENST00000451978 304 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 SNRPGP5-201ENST00000456003 220 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 RNU6-1208P-201ENST00000459588 107 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AL160314.1-201ENST00000490836 438 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 APOOP4-201ENST00000513530 597 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 RN7SKP13-201ENST00000515933 244 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 RNA5SP208-201ENST00000516156 78 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC022690.1-201ENST00000526681 550 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC087241.2-201ENST00000535801 324 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC023050.3-201ENST00000541142 333 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.18□□□□□ -1.74
VTA1Q9NP79 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 VN1R80P-201ENST00000597126 338 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 DPPA3P3-201ENST00000603842 430 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AC110741.2-201ENST00000605278 268 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 AP000553.6-201ENST00000641242 118 ntBASIC4.18□□□□□ -1.74
VTA1Q9NP79 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTA1Q9NP79 MTND5P1-201ENST00000445440 1375 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VTA1Q9NP79 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 AC007685.1-201ENST00000329806 452 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 SNORD9-201ENST00000362566 104 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 RNU4-20P-201ENST00000365601 151 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VTA1Q9NP79 RNU6-116P-201ENST00000384042 109 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 RNU6-434P-201ENST00000384376 107 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 MIR301A-201ENST00000385261 86 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 HSPE1P8-201ENST00000406997 288 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 RPL31P60-201ENST00000478450 367 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 TRBVA-201ENST00000498804 316 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 RNU2-58P-201ENST00000516403 183 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 RNU6-1314P-201ENST00000517139 104 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 RN7SKP256-201ENST00000517201 314 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 AC012603.1-201ENST00000606424 528 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 AC009994.1-201ENST00000606889 253 ntBASIC4.17□□□□□ -1.74
VTA1Q9NP79 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VTA1Q9NP79 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.17□□□□□ -1.74
VTA1Q9NP79 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 AL672296.1-201ENST00000427780 2158 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VTA1Q9NP79 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VTA1Q9NP79 MIR483-201ENST00000385070 76 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AL160275.3-201ENST00000423876 471 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC011742.1-201ENST00000431448 434 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC073063.1-201ENST00000434352 607 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 HMGB1P12-201ENST00000438594 598 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC009237.8-201ENST00000445492 379 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 SCARNA18-201ENST00000459004 134 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 MTND3P22-201ENST00000510932 243 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 IGKV2-23-201ENST00000518729 323 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 AP001804.3-201ENST00000525146 880 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 MTCO3P23-201ENST00000561363 289 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.16□□□□□ -1.74
VTA1Q9NP79 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VTA1Q9NP79 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VTA1Q9NP79 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VTA1Q9NP79 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms