Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC073614.1-201ENST00000438690 650 ntBASIC0.78□□□□□ -2.28
CHD8Q9HCK8 AL035407.2-201ENST00000454090 378 ntBASIC0.78□□□□□ -2.28
CHD8Q9HCK8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 AC022493.1-201ENST00000492984 337 ntBASIC0.78□□□□□ -2.28
CHD8Q9HCK8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 RPS15AP11-201ENST00000594193 385 ntBASIC0.78□□□□□ -2.28
CHD8Q9HCK8 AL713998.2-201ENST00000604538 1198 ntBASIC0.78□□□□□ -2.28
CHD8Q9HCK8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 SNORD97-201ENST00000459187 142 ntBASIC0.78□□□□□ -2.28
CHD8Q9HCK8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.78□□□□□ -2.28
CHD8Q9HCK8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 SNORA63.3-201ENST00000362682 132 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 SNORA62.1-201ENST00000364287 154 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 RPS4XP3-201ENST00000398541 413 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 RAB9AP5-201ENST00000437794 597 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC009296.1-201ENST00000443146 155 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 RAB9AP2-201ENST00000443911 597 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 RNA5SP468-201ENST00000516782 93 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 RNU1-104P-201ENST00000517280 175 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC245884.12-201ENST00000615364 59 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AL031601.2-202ENST00000622650 282 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 RFESDP1-201ENST00000422350 461 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC093716.1-201ENST00000435923 377 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AL121871.1-201ENST00000443413 436 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 ATG12P2-201ENST00000456830 416 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC010285.1-201ENST00000470580 392 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 MRPL42P6-201ENST00000486397 371 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.77□□□□□ -2.29
CHD8Q9HCK8 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 OR4G3P-201ENST00000633500 913 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 AC068620.4-201ENST00000636730 1182 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 ZNF702P-202ENST00000434269 1966 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 ELL2P3-201ENST00000457883 1602 ntBASIC0.77□□□□□ -2.29
CHD8Q9HCK8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RNU4-73P-201ENST00000363164 141 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 SNORA4.3-201ENST00000365564 137 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RNA5SP299-201ENST00000391203 116 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 SSR1P1-201ENST00000407630 814 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RPS29P23-201ENST00000458635 123 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RPL21P104-201ENST00000464143 478 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RN7SKP179-201ENST00000516126 217 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 NBEAP1-201ENST00000554452 979 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC090425.2-201ENST00000608818 501 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC073569.3-201ENST00000619055 682 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC110079.1-202ENST00000635213 138 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 SNORA6-201ENST00000384033 151 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RNA5SP252-201ENST00000391131 119 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 SNORD23.1-201ENST00000408212 104 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RNU4-72P-201ENST00000410754 173 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 RNA5SP498-201ENST00000411342 120 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 SDAD1P2-201ENST00000441308 2028 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 NAP1L1P3-201ENST00000462291 880 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 MIR5194-201ENST00000582634 120 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC002545.1-201ENST00000592511 181 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 AL050343.2-201ENST00000607338 280 ntBASIC0.76□□□□□ -2.29
CHD8Q9HCK8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.76□□□□□ -2.29
CHD8Q9HCK8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 RNA5SP205-201ENST00000364653 136 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 MTND5P14-201ENST00000441481 1267 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AC023932.2-201ENST00000603176 175 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AC097372.5-201ENST00000623665 376 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 RNA5SP118-201ENST00000410385 109 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 MTND5P25-201ENST00000430499 799 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 SNORA31.23-201ENST00000517219 133 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AC109635.4-202ENST00000531666 412 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AP003717.3-201ENST00000544832 1180 ntBASIC0.75□□□□□ -2.29
CHD8Q9HCK8 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.75□□□□□ -2.29
CHD8Q9HCK8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms