Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 AC119674.1-207ENST00000641355 633 ntBASIC3.67□□□□□ -1.82
USP29Q9HBJ7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
USP29Q9HBJ7 OR4G1P-203ENST00000641984 1631 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RNU6-797P-201ENST00000363101 109 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RNU6-14P-201ENST00000384630 106 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 HSPE1P26-201ENST00000405341 275 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RNU2-29P-201ENST00000410423 189 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RPL31P12-201ENST00000422587 358 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RPL21P66-201ENST00000426566 466 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AP000907.1-201ENST00000428428 510 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 MTND1P18-201ENST00000448191 573 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 MTND3P16-201ENST00000452205 344 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 KLHL2P1-201ENST00000508691 521 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC098591.2-201ENST00000510152 315 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC010486.1-201ENST00000511793 424 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RN7SKP60-201ENST00000516985 239 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 RNA5SP503-201ENST00000517047 117 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 SNORA70.24-201ENST00000517233 118 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 OR5B10P-201ENST00000532869 642 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC005951.2-201ENST00000576282 495 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 FAM60BP-201ENST00000578364 658 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 FGF7P1-201ENST00000582820 288 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC012468.1-201ENST00000604888 430 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC069234.5-201ENST00000611056 416 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC022149.2-201ENST00000621061 203 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AL360181.4-201ENST00000621752 134 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AL357559.1-201ENST00000622228 274 ntBASIC3.66□□□□□ -1.82
USP29Q9HBJ7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
USP29Q9HBJ7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
USP29Q9HBJ7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
USP29Q9HBJ7 NACAP2-201ENST00000318548 624 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RNU6-38P-201ENST00000384085 107 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RNU6-332P-201ENST00000391193 108 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RNU6-1148P-201ENST00000410992 104 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 ATP5JP1-201ENST00000431631 322 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RPL21P23-201ENST00000446654 460 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 CYCSP35-201ENST00000451978 304 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 snoU13.4-201ENST00000458916 104 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RNU6-333P-201ENST00000459117 107 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RNU7-180P-201ENST00000459240 63 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 VN1R17P-201ENST00000472048 1090 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC108078.2-201ENST00000510750 236 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC074250.1-201ENST00000511117 192 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC067852.3-201ENST00000589177 561 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL117336.2-201ENST00000602435 335 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 C8orf59P2-201ENST00000603441 271 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC130324.3-201ENST00000614165 542 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.804-201ENST00000615262 101 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC063943.3-201ENST00000615562 356 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AC010133.1-201ENST00000615809 842 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 AL359314.1-201ENST00000616913 261 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.65□□□□□ -1.83
USP29Q9HBJ7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.65□□□□□ -1.83
USP29Q9HBJ7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms