Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SCARNA24.1-201ENST00000516465 137 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 RNA5SP290-201ENST00000517133 127 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 TRAV37-201ENST00000553906 342 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AGGF1P4-201ENST00000568249 801 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC004223.2-201ENST00000590309 544 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC098826.3-201ENST00000603823 466 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AL161798.1-201ENST00000604630 131 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC007619.2-201ENST00000605743 379 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AL139286.2-201ENST00000606838 396 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC098614.4-201ENST00000607601 462 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC103591.3-201ENST00000608684 209 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 Z99129.1-201ENST00000612510 255 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC006386.2-201ENST00000624491 75 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 AC012005.1-201ENST00000624575 75 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 MTND5P42-201ENST00000637720 498 ntBASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1BQ9H9Y6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 Y_RNA.22-201ENST00000362492 102 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-181P-201ENST00000363225 107 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-1103P-201ENST00000384150 107 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 SNORD116-4-201ENST00000384733 96 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC010975.2-201ENST00000427781 588 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 ELOCP14-201ENST00000428070 331 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RPS20P5-201ENST00000434808 360 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 ELOCP7-201ENST00000439968 331 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC132479.1-201ENST00000449160 144 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RPS3AP17-201ENST00000472594 777 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC126389.1-201ENST00000477436 290 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RPL39P36-201ENST00000490784 156 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC023194.1-201ENST00000493084 308 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-445P-201ENST00000516949 107 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC098848.2-201ENST00000588023 330 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AL136363.2-201ENST00000604173 851 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC136601.2-201ENST00000604356 474 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AL136363.1-201ENST00000605349 337 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 AC139792.2-201ENST00000624218 587 ntBASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1BQ9H9Y6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC092447.7-201ENST00000422212 1621 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 UBE2L2-201ENST00000254302 429 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AL357075.1-201ENST00000404107 726 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AL139397.2-201ENST00000404529 772 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 RNU2-66P-201ENST00000410650 161 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-387P-201ENST00000411331 105 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 HSPE1P1-201ENST00000421494 318 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 ISCA1P1-201ENST00000426679 387 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 RPL23AP82-202ENST00000427528 469 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 USP9YP14-201ENST00000430663 563 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 TPTE2P5-203ENST00000458118 728 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC092798.1-201ENST00000458542 409 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 HMGB1P29-201ENST00000505659 499 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 MTND1P15-201ENST00000579262 949 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AC073534.2-201ENST00000620377 381 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms