Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC037471.2-201ENST00000564941 598 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS16Q9H269 Z84480.1-201ENST00000605131 311 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 MIR1302-2-201ENST00000607096 138 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 XIST_intron.1-201ENST00000619444 68 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS16Q9H269 AL160413.1-201ENST00000622780 310 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS16Q9H269 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS16Q9H269 AC100810.6-201ENST00000638068 285 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS16Q9H269 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VPS16Q9H269 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
VPS16Q9H269 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 SNORA63-201ENST00000363450 132 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 Y_RNA.162-201ENST00000363683 102 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 RNU6-74P-201ENST00000384235 107 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 SNORA36C-201ENST00000384289 132 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 MIR1-2-201ENST00000384961 85 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 AL162578.1-201ENST00000406202 378 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 MIR1290-201ENST00000408735 78 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 RNA5SP129-201ENST00000410276 118 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AL356968.1-201ENST00000416622 474 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 RPL23AP82-202ENST00000427528 469 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 RPL7L1P10-201ENST00000427790 463 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS16Q9H269 MTND1P18-201ENST00000448191 573 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC233279.1-201ENST00000455300 423 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 CENPBD1P1-201ENST00000464061 469 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 RNU7-51P-201ENST00000516560 62 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 PSMA2P1-201ENST00000526365 646 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AP003072.1-201ENST00000531740 145 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AC023050.3-201ENST00000541142 333 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AL442663.2-201ENST00000554385 511 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AC010525.2-201ENST00000590920 195 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AC010591.1-201ENST00000603941 649 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 SDR42E1P2-201ENST00000614861 481 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC110801.1-201ENST00000623590 212 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 AC032011.1-201ENST00000611703 1549 ntBASIC3.78□□□□□ -1.8
VPS16Q9H269 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS16Q9H269 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS16Q9H269 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
VPS16Q9H269 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
VPS16Q9H269 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS16Q9H269 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS16Q9H269 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS16Q9H269 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS16Q9H269 AL591416.1-201ENST00000404015 867 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AL359634.1-202ENST00000404721 284 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 ATP5A1P2-201ENST00000412323 255 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC018630.2-202ENST00000422992 927 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 MTCO3P46-201ENST00000425787 232 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC092017.2-201ENST00000427600 362 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC005534.2-201ENST00000431047 433 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS16Q9H269 NOTCH2P1-201ENST00000443481 624 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 RPL21P133-201ENST00000443666 476 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 U3.44-201ENST00000458938 192 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 RN7SL442P-201ENST00000473804 320 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS16Q9H269 AC021205.2-201ENST00000480069 347 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS16Q9H269 HMGN1P11-201ENST00000508668 303 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS16Q9H269 SCARNA24.1-201ENST00000516465 137 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC107934.2-201ENST00000518653 310 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC107953.1-201ENST00000522216 297 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.77□□□□□ -1.81
VPS16Q9H269 IGKV2D-19-201ENST00000523346 262 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 SUB1P1-201ENST00000524415 382 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC011611.1-201ENST00000552179 197 ntBASIC3.77□□□□□ -1.81
VPS16Q9H269 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms