Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC108676.2-201ENST00000605225 163 ntBASIC0.41□□□□□ -2.34
CDH23Q9H251 AL121890.5-201ENST00000620848 304 ntBASIC0.41□□□□□ -2.34
CDH23Q9H251 AC079597.1-201ENST00000624306 508 ntBASIC0.41□□□□□ -2.34
CDH23Q9H251 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CDH23Q9H251 RLIMP2-201ENST00000427891 1563 ntBASIC0.41□□□□□ -2.34
CDH23Q9H251 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.4□□□□□ -2.34
CDH23Q9H251 RPL39P28-201ENST00000465655 155 ntBASIC0.4□□□□□ -2.34
CDH23Q9H251 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.4□□□□□ -2.34
CDH23Q9H251 SNORA9.1-201ENST00000362412 131 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 MIR92A1-201ENST00000385233 78 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CDH23Q9H251 HMGB3P10-201ENST00000434734 572 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.4□□□□□ -2.35
CDH23Q9H251 AC073569.3-201ENST00000619055 682 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 AC083865.1-201ENST00000636634 831 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CDH23Q9H251 MIR101-1-201ENST00000362265 75 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 SNORD56.5-201ENST00000364281 72 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 MIR524-201ENST00000385242 87 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
CDH23Q9H251 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.4□□□□□ -2.35
CDH23Q9H251 MIR4493-201ENST00000584016 73 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 C2orf27A-204ENST00000623058 969 ntBASIC0.4□□□□□ -2.35
CDH23Q9H251 MIR32-201ENST00000384965 70 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CDH23Q9H251 AC005410.1-202ENST00000460347 485 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 Y_RNA.757-201ENST00000578934 114 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 uc_338.9-201ENST00000617424 182 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.39□□□□□ -2.35
CDH23Q9H251 Y_RNA.35-201ENST00000362601 101 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 CISD1P1-201ENST00000393907 327 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 RPL23AP95-201ENST00000426806 265 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.39□□□□□ -2.35
CDH23Q9H251 PRELID3BP1-201ENST00000457142 540 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 AC008749.1-201ENST00000597650 306 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.39□□□□□ -2.35
CDH23Q9H251 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.39□□□□□ -2.35
CDH23Q9H251 RNU4-42P-201ENST00000364738 142 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.39□□□□□ -2.35
CDH23Q9H251 AL357075.2-201ENST00000614906 189 ntBASIC0.39□□□□□ -2.35
CDH23Q9H251 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.38□□□□□ -2.35
CDH23Q9H251 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CDH23Q9H251 AL353706.1-201ENST00000436728 494 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 DUXAP4-201ENST00000603046 613 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.38□□□□□ -2.35
CDH23Q9H251 MIR26B-201ENST00000362251 77 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 SNORA22-201ENST00000383907 134 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 SNORA22C-201ENST00000384614 134 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 RNU6-700P-201ENST00000391043 107 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 AL356379.1-201ENST00000414105 126 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 AC083875.1-201ENST00000419509 405 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 AC073464.3-201ENST00000422564 712 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 AC109809.1-201ENST00000619665 545 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 DBF4P1-201ENST00000412976 1892 ntBASIC0.38□□□□□ -2.35
CDH23Q9H251 Y_RNA.552-201ENST00000384665 112 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 UBE2V2P3-201ENST00000433562 437 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.37□□□□□ -2.35
CDH23Q9H251 SUB1P1-201ENST00000524415 382 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.37□□□□□ -2.35
CDH23Q9H251 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.37□□□□□ -2.35
CDH23Q9H251 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CDH23Q9H251 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.37□□□□□ -2.35
CDH23Q9H251 AC008751.2-201ENST00000597885 980 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 SNORA51.6-201ENST00000384151 125 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 SNORA46.1-201ENST00000391069 153 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 TMEM167AP1-201ENST00000423409 219 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 AC010285.1-201ENST00000470580 392 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 SNORA3.4-201ENST00000515969 96 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 RNU6-347P-201ENST00000516658 105 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.37□□□□□ -2.35
CDH23Q9H251 OOSP1P2-201ENST00000579644 351 ntBASIC0.37□□□□□ -2.35
CDH23Q9H251 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.37□□□□□ -2.35
CDH23Q9H251 AC009090.3-201ENST00000616553 565 ntBASIC0.36□□□□□ -2.35
CDH23Q9H251 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.36□□□□□ -2.35
CDH23Q9H251 RRN3P3-201ENST00000549207 578 ntBASIC0.36□□□□□ -2.35
CDH23Q9H251 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CDH23Q9H251 HSPE1P1-201ENST00000421494 318 ntBASIC0.36□□□□□ -2.35
CDH23Q9H251 AC105252.1-201ENST00000503089 286 ntBASIC0.36□□□□□ -2.35
CDH23Q9H251 SYF2P1-201ENST00000550658 413 ntBASIC0.36□□□□□ -2.35
CDH23Q9H251 EIF4EP3-201ENST00000498782 656 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 AC098862.1-201ENST00000504991 413 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.35□□□□□ -2.35
CDH23Q9H251 RNU4-73P-201ENST00000363164 141 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 RNU6-72P-201ENST00000384285 79 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.35□□□□□ -2.35
CDH23Q9H251 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.35□□□□□ -2.35
CDH23Q9H251 TPT1P8-201ENST00000510120 555 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.35□□□□□ -2.35
CDH23Q9H251 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.35□□□□□ -2.35
CDH23Q9H251 MZT1P2-201ENST00000604387 248 ntBASIC0.35□□□□□ -2.35
CDH23Q9H251 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CDH23Q9H251 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CDH23Q9H251 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.35
CDH23Q9H251 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.34□□□□□ -2.35
CDH23Q9H251 RBM43P1-201ENST00000476891 1081 ntBASIC0.34□□□□□ -2.35
CDH23Q9H251 AC020699.1-201ENST00000505161 445 ntBASIC0.34□□□□□ -2.35
CDH23Q9H251 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CDH23Q9H251 AC106052.1-201ENST00000608029 497 ntBASIC0.34□□□□□ -2.35
CDH23Q9H251 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms