Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU1-83P-201ENST00000363426 164 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 SNORD113-8-201ENST00000363497 74 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.324-201ENST00000365165 102 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.398-201ENST00000383952 99 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AL645733.1-201ENST00000402250 217 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 SNORA11B-201ENST00000408175 129 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-394P-201ENST00000410735 107 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 EI24P1-201ENST00000416584 867 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC000111.2-201ENST00000448200 210 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 snoU13.20-201ENST00000459180 104 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-496P-201ENST00000516145 99 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 SNRPGP16-201ENST00000533275 226 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC120057.2-201ENST00000571520 271 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC104465.1-201ENST00000611365 139 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC034102.8-201ENST00000615146 484 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 AC007785.2-201ENST00000598627 1916 ntBASIC5.25□□□□□ -1.57
NUCKS1Q9H1E3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MAPK10-304ENST00000641341 3984 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 IQCB2P-201ENST00000401788 1633 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RPL9P7-201ENST00000330965 580 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.44-201ENST00000362676 108 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RNA5SP123-201ENST00000363244 119 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-290P-201ENST00000365212 101 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-339P-201ENST00000384310 107 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MIR521-1-201ENST00000384902 87 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RPL23AP48-201ENST00000406913 488 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 HSPE1P8-201ENST00000406997 288 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RPL19P1-201ENST00000411635 428 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AL513043.1-201ENST00000439124 535 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 EEF1A1P1-201ENST00000447052 739 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-1037P-201ENST00000459571 107 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RPL9P9-202ENST00000466501 579 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 HMGB1P25-201ENST00000468402 607 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 SNORD116-28-201ENST00000516123 91 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 RPL21P7-201ENST00000557463 483 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MIR4646-201ENST00000580775 63 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC006077.1-201ENST00000604746 343 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.772-201ENST00000606692 102 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC123768.4-201ENST00000616244 701 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 MIR6130-201ENST00000619419 109 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 CR381572.2-201ENST00000624852 397 ntBASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUCKS1Q9H1E3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.240-201ENST00000364469 95 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.358-201ENST00000365491 99 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 RNY3P4-201ENST00000384428 101 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AL079342.1-201ENST00000401460 267 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AL357515.1-201ENST00000402967 542 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 LAP3P1-201ENST00000403648 294 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 TBCAP2-201ENST00000416175 326 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AL353621.1-201ENST00000418219 243 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AC140479.3-201ENST00000418944 1126 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AL590762.4-201ENST00000425885 253 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 SNORA31.3-201ENST00000516029 96 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-313P-201ENST00000516317 112 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-62P-201ENST00000516526 102 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 RNU6-914P-201ENST00000516749 109 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms