Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDH11YQ9BZA8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH11YQ9BZA8 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.9
PCDH11YQ9BZA8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH11YQ9BZA8 RNA5SP456-201ENST00000364002 114 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 RNU5A-8P-201ENST00000364102 114 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 BTF3P7-201ENST00000407097 488 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 FCF1P10-201ENST00000407590 479 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 USP9YP13-201ENST00000417797 480 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 SDCBPP3-201ENST00000419629 891 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 RPL21P32-201ENST00000419877 477 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 RPL26P6-201ENST00000440913 438 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL360221.1-201ENST00000445989 335 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL592447.1-201ENST00000447592 540 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 ST13P20-201ENST00000447996 1065 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC126182.1-201ENST00000478134 357 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 MTND4LP22-201ENST00000508209 276 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC022616.6-201ENST00000520479 119 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC123904.2-201ENST00000548059 300 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL133153.1-201ENST00000557756 303 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL358072.1-201ENST00000604156 575 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AC090970.3-201ENST00000612566 866 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL603758.1-201ENST00000618654 241 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 AL353746.1-201ENST00000566293 6881 ntBASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH11YQ9BZA8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RNA5SP210-201ENST00000391034 120 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AL109755.1-201ENST00000401791 649 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC007064.1-201ENST00000412238 351 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 HMGN1P14-201ENST00000412459 517 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC108059.3-201ENST00000456388 214 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RNU6-956P-201ENST00000458868 103 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MTND4LP3-201ENST00000468320 276 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 SNORA31.22-201ENST00000517204 135 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AP003467.2-201ENST00000520175 319 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC021269.2-201ENST00000532318 330 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC007115.1-201ENST00000546853 234 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC005771.1-201ENST00000585581 349 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC087752.4-201ENST00000605911 462 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AL603839.4-201ENST00000624658 1005 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AL390237.1-201ENST00000404226 1415 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RNU6-278P-201ENST00000390945 109 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 DPH3P2-201ENST00000422618 250 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RPL27AP8-201ENST00000424277 446 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RPL17P49-201ENST00000443728 411 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 snoU109.1-201ENST00000459339 135 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC010424.1-201ENST00000506336 297 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC092436.1-201ENST00000506450 503 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AL163153.1-201ENST00000554223 283 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MIR3921-201ENST00000577308 85 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MIR5092-201ENST00000583139 88 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC105224.1-201ENST00000587055 421 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RN7SKP299-201ENST00000606679 301 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 RNU6-87P-201ENST00000607561 108 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms