Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 NCAPGP1-201ENST00000505112 1814 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 Y_RNA.245-201ENST00000364493 95 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 RNU6-61P-201ENST00000365528 109 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 Y_RNA.450-201ENST00000384198 113 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 RPS4XP3-201ENST00000398541 413 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 RNU2-29P-201ENST00000410423 189 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC063979.1-201ENST00000415539 377 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC093106.2-201ENST00000428212 385 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC007919.1-201ENST00000429380 217 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 USP9YP28-201ENST00000435142 589 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 RPL7P54-201ENST00000438336 674 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 Z99127.3-201ENST00000448158 395 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC006512.1-201ENST00000468816 291 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC096576.1-201ENST00000489014 359 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 RNA5SP290-201ENST00000517133 127 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 MIR4775-201ENST00000581168 75 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL162413.1-201ENST00000603198 110 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 BNIP3P9-201ENST00000603714 553 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL033523.1-201ENST00000605153 153 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL160394.1-201ENST00000624765 724 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL049641.1-201ENST00000441055 1948 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 AL359693.1-201ENST00000614959 2407 ntBASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTFDC1Q9BY42 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RNU1-18P-201ENST00000363062 164 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RNY4P14-201ENST00000363656 96 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RPS12P24-201ENST00000412619 387 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 BTF3L4P3-201ENST00000418879 476 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL353678.1-201ENST00000422735 741 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL158071.1-201ENST00000430315 461 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL512844.2-201ENST00000433990 593 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 SEPT14P3-201ENST00000439401 183 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 PIGFP3-201ENST00000441918 722 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL732372.2-207ENST00000445840 183 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 SEPT14P2-201ENST00000453405 183 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RNU6-420P-201ENST00000458780 107 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RNA5SP310-201ENST00000459084 116 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 RPS15AP34-201ENST00000487776 387 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 HMGB3P15-201ENST00000507326 574 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 SEPT14P4-201ENST00000513445 186 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 APOOP4-201ENST00000513530 597 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 SNORA40.12-201ENST00000516329 111 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 FO082796.1-201ENST00000523795 183 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC022690.1-201ENST00000526681 550 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 OR5B19P-201ENST00000531766 928 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC026333.2-201ENST00000542164 106 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC024619.4-201ENST00000580924 316 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC093788.1-201ENST00000609356 927 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC006386.2-201ENST00000624491 75 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC012005.1-201ENST00000624575 75 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 MIR1321-201ENST00000637766 79 ntBASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTFDC1Q9BY42 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 AP001148.1-201ENST00000624124 2359 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 UBE2L2-201ENST00000254302 429 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNU6-1287P-201ENST00000362914 107 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNA5SP197-201ENST00000363357 119 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNU6-996P-201ENST00000365438 107 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 Y_RNA.409-201ENST00000383990 98 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNU6-14P-201ENST00000384630 106 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 RNU6-1060P-201ENST00000384664 107 ntBASIC4.1□□□□□ -1.75
RTFDC1Q9BY42 MIR301A-201ENST00000385261 86 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms