Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AL360012.1-201ENST00000602813 131 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AC008814.1-201ENST00000603797 406 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 FAM27B-201ENST00000610601 213 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AC100778.3-201ENST00000580060 1750 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AL731532.2-201ENST00000623542 1953 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AL731556.1-201ENST00000394628 3711 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AL592182.3-201ENST00000642132 3304 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RNA5SP391-201ENST00000363456 119 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.182-201ENST00000363880 111 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 U8.7-201ENST00000364940 136 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RNU4-11P-201ENST00000365287 132 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RNU6-729P-201ENST00000384399 107 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 MIR513C-201ENST00000401352 84 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AC063979.1-201ENST00000415539 377 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 CRIP1P1-201ENST00000427567 185 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 USP9YP7-201ENST00000436723 430 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RPL23AP93-201ENST00000440847 484 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AC009237.7-201ENST00000447357 229 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 EEF1B2P7-201ENST00000451177 676 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 USP9YP32-201ENST00000452432 430 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RPL21P6-201ENST00000479171 504 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AC093815.1-201ENST00000508637 280 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RNU6-168P-201ENST00000516189 101 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 ATP5F1P5-201ENST00000526403 760 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 DEFB131C-201ENST00000528817 165 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AP000787.2-201ENST00000604432 568 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 RPL23AP88-201ENST00000605759 454 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 AC004825.2-201ENST00000616634 455 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 MIR3653-201ENST00000625572 110 ntBASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL25A1Q9BXS0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 RNA5SP22-201ENST00000365393 109 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 RNU6-827P-201ENST00000365553 106 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.534-201ENST00000384599 112 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 RPL7AP73-201ENST00000413490 353 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AC099677.1-201ENST00000420575 175 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 RPL23AP58-201ENST00000440453 469 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AC016700.2-201ENST00000446011 156 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 TOMM22P6-201ENST00000465035 409 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 RAC1P5-201ENST00000512182 576 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.694-201ENST00000516677 117 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 RN7SKP258-201ENST00000517151 304 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AC137627.1-201ENST00000545761 289 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 BPIFA4P-203ENST00000603168 689 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AL034351.1-201ENST00000605288 668 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 SNORA51-201ENST00000606420 132 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 TCL6_3.1-201ENST00000619064 137 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 AP005019.3-201ENST00000620418 560 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 CR381572.2-201ENST00000624852 397 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 MARK2P15-201ENST00000432204 2186 ntBASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL25A1Q9BXS0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC015813.6-201ENST00000624409 5808 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC116096.1-201ENST00000566804 2314 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms