Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 EDDM3DP-201ENST00000554692 434 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 CPDP1-201ENST00000579660 283 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC209154.1-201ENST00000582156 337 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC098826.3-201ENST00000603823 466 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AP000787.2-201ENST00000604432 568 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 uc_338.18-201ENST00000615451 175 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AL159153.1-201ENST00000619688 317 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC005086.4-201ENST00000623065 213 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 MAPK10-303ENST00000641324 3959 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
TRIM56Q9BRZ2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.78□□□□□ -1.65
TRIM56Q9BRZ2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
TRIM56Q9BRZ2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.64-201ENST00000362845 102 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 RNY3P11-201ENST00000364153 102 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.518-201ENST00000384552 113 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC007098.1-201ENST00000420122 367 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 NDUFB4P7-201ENST00000423198 363 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC139712.2-201ENST00000424302 339 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC079168.2-201ENST00000453977 416 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 snoU13.24-201ENST00000458998 104 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 RNU7-169P-201ENST00000459456 61 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-1037P-201ENST00000459571 107 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 SUMO2P6-201ENST00000505273 288 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 HMGB1P22-201ENST00000505315 124 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC133555.2-201ENST00000550213 292 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC090517.1-201ENST00000569307 266 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC011487.3-201ENST00000593607 453 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AL161798.1-201ENST00000604630 131 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 AC087385.3-201ENST00000620477 187 ntBASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM56Q9BRZ2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 MTND5P6-201ENST00000422338 1798 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 OR4G2P-202ENST00000641004 1759 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.33-201ENST00000362591 102 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 RNVU1-6-201ENST00000364688 164 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.477-201ENST00000384352 108 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-1093P-201ENST00000391194 107 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AL590762.2-201ENST00000395798 571 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC079780.1-201ENST00000428259 207 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC006946.1-201ENST00000429106 328 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 MTND4LP30-201ENST00000454092 297 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AURKAPS2-201ENST00000454983 333 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC133134.1-201ENST00000466800 359 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC010285.1-201ENST00000470580 392 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 FO393415.2-201ENST00000480085 343 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AL049874.1-201ENST00000489560 388 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC084851.1-201ENST00000529105 249 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 FAM27B-201ENST00000610601 213 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 SDR42E1P4-201ENST00000620894 481 ntBASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM56Q9BRZ2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 ZNF299P-201ENST00000406845 1804 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 U8.8-201ENST00000365399 135 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-700P-201ENST00000391043 107 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms