Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 RPS29P26-201ENST00000477483 171 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 RPS27P26-201ENST00000494583 239 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 Y_RNA.672-201ENST00000516289 104 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 SCARNA13-201ENST00000516672 275 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC008088.1-201ENST00000580993 280 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 MIR548AB-201ENST00000584917 84 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 DUXAP4-201ENST00000603046 613 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC121247.2-201ENST00000604776 136 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 MIR7106-201ENST00000612419 65 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AL603839.4-201ENST00000624658 1005 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 SNORA80A-201ENST00000363922 136 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 RNU4-91P-201ENST00000364778 135 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 RNU2-8P-201ENST00000410727 190 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 ATG3P1-201ENST00000419507 911 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 MTATP6P17-201ENST00000431030 672 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 RPL23AP58-201ENST00000440453 469 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 MTND1P26-201ENST00000440488 538 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 USP9YP15-201ENST00000442391 422 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC096576.1-201ENST00000489014 359 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 NDUFB4P2-201ENST00000509515 391 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 SUB1P1-201ENST00000524415 382 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC010653.1-201ENST00000571108 881 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 HMGN2P15-201ENST00000585707 270 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 BNIP3P8-201ENST00000597863 560 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC174048.1-201ENST00000603389 144 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC015871.2-201ENST00000603605 948 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC104763.2-201ENST00000604179 382 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC007363.1-201ENST00000604736 620 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AL451064.1-201ENST00000607718 471 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AL365204.3-201ENST00000612448 685 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 SCARNA15.3-201ENST00000626315 122 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 SCARNA4.1-201ENST00000628597 123 ntBASIC3.31□□□□□ -1.88
SDF4Q9BRK5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SDF4Q9BRK5 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RNU6-512P-201ENST00000364438 103 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 SMIM11P1-201ENST00000369586 178 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RNA5SP354-201ENST00000391247 136 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RPL23AP32-201ENST00000395315 459 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RN7SKP123-201ENST00000410732 291 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC119618.1-201ENST00000434191 222 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 MTND6P13-201ENST00000443510 523 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 WASF1P1-201ENST00000447560 1131 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RPL26P9-201ENST00000457466 433 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RNU6-953P-201ENST00000459154 107 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RPL36AP51-201ENST00000487216 318 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RPL39P36-201ENST00000490784 156 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RNA5SP385-201ENST00000515947 110 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RNA5SP165-201ENST00000517142 115 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC025811.1-201ENST00000604312 472 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC068276.1-201ENST00000605793 379 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC090115.4-201ENST00000609970 188 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 AC091304.9-201ENST00000612091 226 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 MAPK10-266ENST00000641066 6555 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.3□□□□□ -1.88
SDF4Q9BRK5 ZNF519P1-201ENST00000449011 1626 ntBASIC3.3□□□□□ -1.88
SDF4Q9BRK5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 RNU6-778P-201ENST00000363269 103 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 SNORD88.1-201ENST00000408684 91 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
SDF4Q9BRK5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.29□□□□□ -1.88
SDF4Q9BRK5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms