Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1□□□□□ -2.25
VPS25Q9BRG1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1□□□□□ -2.25
VPS25Q9BRG1 AC006338.1-201ENST00000618453 749 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 MIR6810-201ENST00000622701 70 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1□□□□□ -2.25
VPS25Q9BRG1 MIR219B-201ENST00000637023 88 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 MTND4P23-201ENST00000447723 1363 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 RNU6-661P-201ENST00000362409 107 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 SNORA27.3-201ENST00000364937 134 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 RNU6-657P-201ENST00000383904 107 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 MIR29C-201ENST00000385231 88 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 MCTS2P-201ENST00000394552 546 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 RNU2-36P-201ENST00000410361 191 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 OR51A3P-201ENST00000413596 924 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AL445646.1-201ENST00000431784 216 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 USP9YP35-201ENST00000435696 412 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC132942.1-201ENST00000486753 483 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC139453.3-201ENST00000493276 369 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 RPL22P13-201ENST00000493291 347 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 RPL38P4-201ENST00000502376 214 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC097462.2-201ENST00000504623 481 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 RNU6-902P-201ENST00000517212 91 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 ARL2BPP5-201ENST00000523141 481 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AP003034.1-201ENST00000534621 422 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AP003485.2-201ENST00000623636 610 ntBASIC0.99□□□□□ -2.25
VPS25Q9BRG1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.99□□□□□ -2.25
VPS25Q9BRG1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 RNU6-878P-201ENST00000384578 110 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 MIR518D-201ENST00000385014 87 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 MIR1304-201ENST00000408243 91 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 USP9YP19-201ENST00000412165 485 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 UBE2Q2P12-201ENST00000414573 204 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 USP9YP13-201ENST00000417797 480 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 C1DP1-201ENST00000426049 402 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC005908.1-201ENST00000468701 347 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC018437.1-201ENST00000492214 406 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC093801.2-201ENST00000503966 1050 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC107393.1-201ENST00000512403 346 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC114781.4-201ENST00000513707 639 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 RPL21P5-201ENST00000554662 472 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 MIR1254-2-201ENST00000579553 63 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC091152.3-201ENST00000604227 325 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 AC090617.9-201ENST00000623751 147 ntBASIC0.98□□□□□ -2.25
VPS25Q9BRG1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS25Q9BRG1 MIR525-201ENST00000384978 85 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 SNRPEP2-201ENST00000397592 279 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 TPTE2P1-204ENST00000435256 593 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC096638.1-201ENST00000444678 216 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 HMGN1P5-201ENST00000448591 263 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 FABP5P13-201ENST00000452144 328 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 KATNBL1P6-201ENST00000453433 915 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AP001324.2-201ENST00000461163 319 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC069528.1-202ENST00000482888 637 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC008127.2-201ENST00000549925 1075 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC009063.1-201ENST00000563342 702 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 LARP7P3-201ENST00000579888 337 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 MIR4429-201ENST00000580105 73 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS25Q9BRG1 BNIP3P23-201ENST00000599655 511 ntBASIC0.97□□□□□ -2.25
VPS25Q9BRG1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms