Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 AL450326.2-201ENST00000421913 1962 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USB1Q9BQ65 SNORA63.4-201ENST00000362763 126 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 Y_RNA.420-201ENST00000384043 110 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 RNU6-578P-201ENST00000390980 103 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USB1Q9BQ65 RN7SKP206-201ENST00000410823 293 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 CTSL3P-202ENST00000412179 788 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 OR2AT2P-201ENST00000413438 905 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 AC079168.2-201ENST00000453977 416 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 AURKAPS2-201ENST00000454983 333 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 RN7SKP164-201ENST00000516138 266 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 AP004371.1-201ENST00000525240 214 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 TRAV28-201ENST00000557548 323 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 MIR3614-201ENST00000581261 86 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 AC020895.1-201ENST00000595362 272 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 AC011445.2-201ENST00000599274 173 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 uc_338.26-201ENST00000612659 160 ntBASIC5.17□□□□□ -1.58
USB1Q9BQ65 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USB1Q9BQ65 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USB1Q9BQ65 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 CUL1P1-201ENST00000509510 2425 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 SNORD56.1-201ENST00000362913 68 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 Z98749.2-208ENST00000381646 500 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 SDC4P-201ENST00000453285 601 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 AC016632.1-201ENST00000503994 196 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 IGKV3D-34-201ENST00000522638 302 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 MIR4458-201ENST00000578872 75 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 AC109309.2-201ENST00000612597 332 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 AL034408.1-202ENST00000636088 415 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 AC004817.4-201ENST00000602396 3625 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 AP001029.2-203ENST00000589795 4910 ntBASIC5.16□□□□□ -1.58
USB1Q9BQ65 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.16□□□□□ -1.58
USB1Q9BQ65 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USB1Q9BQ65 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
USB1Q9BQ65 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
USB1Q9BQ65 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 LINC01963-201ENST00000562038 3148 ntBASIC5.15□□□□□ -1.58
USB1Q9BQ65 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
USB1Q9BQ65 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
USB1Q9BQ65 RNU6-103P-201ENST00000363686 107 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 Y_RNA.179-201ENST00000363844 90 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 RNU6-898P-201ENST00000365627 104 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 RNU6-1310P-201ENST00000384153 107 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 SNORA36A-201ENST00000384221 132 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 MIR518D-201ENST00000385014 87 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 RNU2-54P-201ENST00000410299 190 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 RPL23AP58-201ENST00000440453 469 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 AC023141.8-201ENST00000442554 208 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 AL161636.2-201ENST00000445179 927 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 snoU13.6-201ENST00000458785 104 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 ACA64.4-201ENST00000459070 127 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 RPL23AP14-201ENST00000468281 468 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 RNU6-703P-201ENST00000516946 107 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 AC006115.2-201ENST00000596823 202 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.15□□□□□ -1.59
USB1Q9BQ65 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USB1Q9BQ65 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms