Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RAD9AQ99638 AC092104.1-201ENST00000497346 1441 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RAD9AQ99638 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 RNY4P34-201ENST00000364779 95 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 Y_RNA.318-201ENST00000365131 97 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 RNY3P13-201ENST00000365542 102 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RAD9AQ99638 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
RAD9AQ99638 RNU6-248P-201ENST00000410720 107 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 ELOCP17-201ENST00000414751 326 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AC006366.1-201ENST00000422002 759 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 OR2AS1P-201ENST00000427827 319 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AL590383.1-201ENST00000428602 75 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 MYL8P-204ENST00000431574 518 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 VN1R108P-201ENST00000431580 830 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.11□□□□□ -1.91
RAD9AQ99638 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.11□□□□□ -1.91
RAD9AQ99638 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AL049874.1-201ENST00000489560 388 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.11□□□□□ -1.91
RAD9AQ99638 AC079140.3-201ENST00000511111 550 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 RNU2-46P-201ENST00000517038 113 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 RNU6-64P-201ENST00000517119 105 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.11□□□□□ -1.91
RAD9AQ99638 AC123904.3-201ENST00000547218 814 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.11□□□□□ -1.91
RAD9AQ99638 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 SDR42E1P2-201ENST00000614861 481 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 uc_338.12-201ENST00000616344 181 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AC009509.4-201ENST00000619202 509 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AC243829.7-201ENST00000633081 225 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 AC092435.3-201ENST00000565538 3654 ntBASIC3.11□□□□□ -1.91
RAD9AQ99638 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.1□□□□□ -1.91
RAD9AQ99638 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAD9AQ99638 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RAD9AQ99638 U8.3-201ENST00000363321 132 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 RNU4-24P-201ENST00000364565 139 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 Y_RNA.359-201ENST00000365498 102 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 RNU1-39P-201ENST00000383897 165 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 RNU6-1197P-201ENST00000391183 107 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 CDK8P2-201ENST00000415020 547 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 RPS15AP12-201ENST00000419498 388 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 ATG3P1-201ENST00000419507 911 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AL031667.1-201ENST00000440222 725 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AL513328.1-201ENST00000446460 224 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AL513124.1-201ENST00000450410 614 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 NIPA2P5-201ENST00000452282 464 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AL359385.1-201ENST00000456509 365 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AC146507.2-201ENST00000460608 476 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC010587.1-201ENST00000505809 469 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AC114797.1-201ENST00000514003 728 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AP002963.1-201ENST00000530590 184 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 MIR3682-201ENST00000581338 84 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.1□□□□□ -1.91
RAD9AQ99638 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.1□□□□□ -1.91
RAD9AQ99638 AC008277.2-201ENST00000605196 797 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC091304.9-201ENST00000612091 226 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC011939.3-201ENST00000613686 466 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC004696.1-201ENST00000614345 607 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC090132.2-201ENST00000615881 347 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 SNHG22-203ENST00000617833 660 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AC092656.1-203ENST00000624134 423 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAD9AQ99638 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAD9AQ99638 OR4G2P-202ENST00000641004 1759 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 AL355596.1-201ENST00000565399 3996 ntBASIC3.1□□□□□ -1.91
RAD9AQ99638 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RAD9AQ99638 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.09□□□□□ -1.91
RAD9AQ99638 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RAD9AQ99638 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAD9AQ99638 RNU6-1284P-201ENST00000363701 100 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 U3.12-201ENST00000364498 214 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.09□□□□□ -1.91
RAD9AQ99638 RNU6-348P-201ENST00000384386 107 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 MIR34A-201ENST00000385130 110 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 MORF4L1P6-201ENST00000418771 268 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 ARL5AP4-201ENST00000430731 512 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 AC119618.1-201ENST00000434191 222 ntBASIC3.09□□□□□ -1.91
RAD9AQ99638 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms