Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.95□□□□□ -2.1
VAT1Q99536 AC025755.1-201ENST00000521306 278 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AC118942.1-201ENST00000529674 1035 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AP003168.1-201ENST00000530091 307 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AC010186.2-204ENST00000537668 439 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.95□□□□□ -2.1
VAT1Q99536 AL132657.2-201ENST00000564417 358 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 MIR4513-201ENST00000581077 86 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.95□□□□□ -2.1
VAT1Q99536 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.95□□□□□ -2.1
VAT1Q99536 AL449363.1-201ENST00000617815 186 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AL158163.2-201ENST00000619110 700 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AP000943.4-201ENST00000622912 357 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
VAT1Q99536 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
VAT1Q99536 AC110491.1-201ENST00000562191 2010 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VAT1Q99536 KPNA2P1-201ENST00000458289 1591 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
VAT1Q99536 RNU6-224P-201ENST00000384055 107 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 RNU6-253P-201ENST00000384730 105 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AL356421.1-201ENST00000403255 413 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC019129.1-201ENST00000403786 261 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 CCNG1P1-201ENST00000406783 885 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.94□□□□□ -2.1
VAT1Q99536 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.94□□□□□ -2.1
VAT1Q99536 SKA2P1-201ENST00000425592 390 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.94□□□□□ -2.1
VAT1Q99536 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 MICF-203ENST00000432679 129 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 UBE2FP3-201ENST00000436366 524 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 SNRPEP9-201ENST00000436794 238 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC098831.1-201ENST00000440661 216 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.94□□□□□ -2.1
VAT1Q99536 SNORA59A-201ENST00000459326 152 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 KLF3P2-201ENST00000465138 268 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC069528.1-202ENST00000482888 637 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 RPL38P4-201ENST00000502376 214 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 LTV1P1-201ENST00000510683 1237 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AP005902.1-201ENST00000521358 186 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.94□□□□□ -2.1
VAT1Q99536 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 AC007151.1-201ENST00000572774 483 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC025588.2-201ENST00000604851 466 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AC004805.2-201ENST00000605382 482 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.94□□□□□ -2.1
VAT1Q99536 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.94□□□□□ -2.1
VAT1Q99536 AL031601.2-202ENST00000622650 282 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 U2.21-201ENST00000637295 81 ntBASIC1.94□□□□□ -2.1
VAT1Q99536 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
VAT1Q99536 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VAT1Q99536 U8.2-201ENST00000363156 134 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 SNORA40.2-201ENST00000390847 128 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.93□□□□□ -2.1
VAT1Q99536 CYCSP48-201ENST00000417124 323 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.93□□□□□ -2.1
VAT1Q99536 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.93□□□□□ -2.1
VAT1Q99536 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.93□□□□□ -2.1
VAT1Q99536 TIMM9P2-201ENST00000419324 266 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.93□□□□□ -2.1
VAT1Q99536 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.93□□□□□ -2.1
VAT1Q99536 ZYG11AP1-201ENST00000430329 837 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.93□□□□□ -2.1
VAT1Q99536 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.93□□□□□ -2.1
VAT1Q99536 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.93□□□□□ -2.1
VAT1Q99536 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.93□□□□□ -2.1
VAT1Q99536 TRBV1-201ENST00000476502 284 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.93□□□□□ -2.1
VAT1Q99536 SCARNA3-201ENST00000517097 143 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 RNA5SP290-201ENST00000517133 127 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 HMGN1P28-201ENST00000521340 364 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 DEFB131D-201ENST00000526803 184 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AC005832.3-201ENST00000537929 631 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AC007375.1-201ENST00000554513 578 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.93□□□□□ -2.1
VAT1Q99536 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.93□□□□□ -2.1
VAT1Q99536 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.93□□□□□ -2.1
VAT1Q99536 AL391813.1-201ENST00000603098 260 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL450336.1-201ENST00000605180 586 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL021997.1-201ENST00000605757 193 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AL158211.2-201ENST00000607282 395 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AC104985.3-201ENST00000623479 597 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.93□□□□□ -2.1
VAT1Q99536 AC110994.2-201ENST00000635481 492 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 AC099063.3-201ENST00000642066 185 ntBASIC1.93□□□□□ -2.1
VAT1Q99536 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VAT1Q99536 MTND5P29-201ENST00000458676 1807 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VAT1Q99536 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.92□□□□□ -2.1
VAT1Q99536 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VAT1Q99536 RNU6-778P-201ENST00000363269 103 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms