Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 MIR8062-201ENST00000621515 85 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 AC112484.5-201ENST00000624189 228 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNGAP1Q96PV0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AC010329.2-201ENST00000595195 2737 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AL359893.1-201ENST00000447628 1580 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AL137003.2-201ENST00000606924 2538 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 MIR372-201ENST00000362225 67 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-266P-201ENST00000364225 107 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-1303P-201ENST00000364841 107 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-842P-201ENST00000384269 107 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-1026P-201ENST00000384465 108 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-790P-201ENST00000384479 105 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 SNORA41-201ENST00000384675 132 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 MIR1302-6-201ENST00000408466 90 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 HMGB1P9-201ENST00000429856 646 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 OR2AQ1P-201ENST00000451972 200 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-475P-201ENST00000516073 104 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AP006587.4-201ENST00000526053 529 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 AC125232.2-201ENST00000592457 143 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 RPL7P50-201ENST00000600588 727 ntBASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SYNGAP1Q96PV0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AL133243.3-201ENST00000617415 3004 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AC107027.3-201ENST00000565095 3473 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 Y_RNA.48-201ENST00000362710 103 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 RNU1-14P-201ENST00000362759 152 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AC019155.1-201ENST00000382242 574 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AL137014.1-201ENST00000420490 1226 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AL157831.1-201ENST00000426134 473 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 RPS26P47-201ENST00000427219 348 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AC004866.2-201ENST00000438285 481 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 PCMTD1P1-201ENST00000455560 355 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AP000942.1-201ENST00000463969 747 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 RPS23P3-201ENST00000470993 430 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AC022795.1-201ENST00000473808 480 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-840P-201ENST00000517275 65 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 IGHV3-76-201ENST00000522465 295 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 MIR4286-201ENST00000580651 93 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 ELOCP5-201ENST00000604924 333 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 SNORA51-201ENST00000606420 132 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 MIR6867-201ENST00000610636 67 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AL021879.1-201ENST00000611756 288 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AL021997.2-201ENST00000615674 271 ntBASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNGAP1Q96PV0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 LINC01355-201ENST00000566551 5444 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AL035425.3-201ENST00000564206 4996 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 Y_RNA.106-201ENST00000363189 100 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 RNA5SP283-201ENST00000365604 119 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 SNORA68.2-201ENST00000391263 128 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 MIR1250-201ENST00000408098 113 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms