Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 MIR4658-201ENST00000584344 65 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 U2.21-201ENST00000637295 81 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC004944.1-201ENST00000517807 3059 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 RNU6-433P-201ENST00000363216 104 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 Y_RNA.245-201ENST00000364493 95 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 RNU6-750P-201ENST00000390946 107 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 RNU6-757P-201ENST00000410334 100 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 HMGB1P49-201ENST00000418882 569 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC244035.1-201ENST00000430042 390 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 MYL8P-204ENST00000431574 518 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 RPL7P36-201ENST00000444633 681 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 ELOCP30-201ENST00000447108 299 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 CECR9-201ENST00000453421 199 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 SCARNA11.3-201ENST00000517276 130 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AL512310.1-201ENST00000548639 172 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC097468.3-201ENST00000607956 456 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC007038.2-201ENST00000608095 740 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC004908.2-201ENST00000609090 574 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC097478.2-201ENST00000610572 514 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 HMGB1P24-202ENST00000615653 685 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 AC022306.3-201ENST00000619930 550 ntBASIC2.42□□□□□ -2.02
RPRD1AQ96P16 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
RPRD1AQ96P16 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 U8.8-201ENST00000365399 135 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 RNU4-53P-201ENST00000410828 140 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 USP9YP27-201ENST00000418455 438 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AL035407.1-201ENST00000429211 571 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC005094.1-201ENST00000440420 368 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 RNU7-26P-201ENST00000458980 63 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 RNU5F-8P-201ENST00000515941 111 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 RNA5SP281-201ENST00000516504 135 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AP002770.2-201ENST00000543613 532 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC136618.2-201ENST00000575091 400 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 BCRP9-201ENST00000605312 388 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 RNU6-88P-201ENST00000606801 100 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AL356596.1-201ENST00000624230 379 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC110491.1-201ENST00000562191 2010 ntBASIC2.41□□□□□ -2.02
RPRD1AQ96P16 AC006020.1-201ENST00000420179 1854 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 RNU6-1167P-201ENST00000363227 94 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 RNU6-778P-201ENST00000363269 103 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 RNU6-723P-201ENST00000383973 107 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 AL359634.1-202ENST00000404721 284 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 AC107081.1-201ENST00000414975 361 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.4□□□□□ -2.03
RPRD1AQ96P16 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.4□□□□□ -2.03
RPRD1AQ96P16 Z80107.1-201ENST00000436830 412 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 RNU7-59P-201ENST00000459101 61 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 RPS27P27-201ENST00000498779 255 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 MTATP6P9-201ENST00000515039 680 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 BTF3P12-201ENST00000519620 469 ntBASIC2.4□□□□□ -2.03
RPRD1AQ96P16 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms