Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC016696.1-201ENST00000446949 318 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AL353691.1-201ENST00000451332 387 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 HMGB1P22-201ENST00000505315 124 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC099522.1-202ENST00000514718 367 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AL133153.1-201ENST00000557756 303 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC008269.2-201ENST00000561915 1105 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC092747.3-201ENST00000603769 301 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC006329.2-201ENST00000611491 394 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AL590099.1-201ENST00000615276 138 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 MIR6875-201ENST00000617506 72 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AL357559.1-201ENST00000622228 274 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AC025034.2-201ENST00000623264 286 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 U6.114-201ENST00000636407 96 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 FAM35DP-201ENST00000323387 2712 ntBASIC3.44□□□□□ -1.86
ZNF48Q96MX3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF48Q96MX3 BDP1P-201ENST00000582658 1990 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RLIMP1-201ENST00000339626 1680 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RNU6-61P-201ENST00000365528 109 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RNU6-601P-201ENST00000384540 107 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RNU6-821P-201ENST00000390995 107 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AL360182.1-201ENST00000397433 468 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 MRPL42P3-201ENST00000401492 326 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RNU2-15P-201ENST00000410692 191 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 POLHP1-201ENST00000411806 470 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RPS23P10-201ENST00000416185 486 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RPL36AP6-201ENST00000435770 321 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 Z95327.1-201ENST00000446082 482 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC104058.1-201ENST00000448028 297 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 snoU13.24-201ENST00000458998 104 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 MTND4LP22-201ENST00000508209 276 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RNU6-764P-201ENST00000516396 105 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 RANP9-201ENST00000519957 271 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 SYF2P1-201ENST00000550658 413 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 OR11H5P-201ENST00000554039 926 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC138761.3-201ENST00000579993 334 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 HMGB1P50-201ENST00000605814 607 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 MIR92B-201ENST00000607575 96 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC012409.4-201ENST00000612923 249 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AC133104.2-201ENST00000615272 193 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 U4.1-201ENST00000620349 87 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AL136313.1-201ENST00000624804 202 ntBASIC3.43□□□□□ -1.86
ZNF48Q96MX3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF48Q96MX3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 ZNF807-201ENST00000328088 1707 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.149-201ENST00000363558 117 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 SNORA24.1-201ENST00000384401 135 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 MIR1911-201ENST00000410783 80 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.646-201ENST00000410980 101 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RNU2-71P-201ENST00000411395 189 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC114491.1-201ENST00000416095 246 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RAC1P6-201ENST00000423911 575 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms