Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 AC073073.2-201ENST00000609827 2578 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 Y_RNA.212-201ENST00000364177 102 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 MIR450B-201ENST00000401182 78 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 HSPE1P26-201ENST00000405341 275 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 PPIAP31-201ENST00000405422 495 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AL158156.1-201ENST00000422509 473 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 C4BPAP2-201ENST00000428434 478 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 RPL23AP69-201ENST00000431134 458 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 RN7SL860P-201ENST00000473738 223 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC079140.5-201ENST00000507882 310 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC008716.1-201ENST00000511084 513 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 RNU6-1088P-201ENST00000516850 104 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AL157871.3-201ENST00000557231 293 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC090877.1-201ENST00000561418 344 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC025627.2-201ENST00000576220 160 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 MIR5692C1-201ENST00000585309 91 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AL356055.1-201ENST00000602528 446 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AC110741.2-201ENST00000605278 268 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 SNORD39.4-201ENST00000620099 78 ntBASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 RNU6-395P-201ENST00000365662 106 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 Y_RNA.480-201ENST00000384364 102 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 HLFP1-201ENST00000402375 499 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AL391417.1-201ENST00000404100 426 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 RAB28P1-201ENST00000411517 641 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 RPS20P15-201ENST00000412792 311 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 VN1R36P-201ENST00000414936 291 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AL356387.2-201ENST00000422272 243 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC011998.1-201ENST00000433403 117 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC005019.1-201ENST00000436455 431 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 NDUFB4P6-201ENST00000436819 366 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 HMGB1P12-201ENST00000438594 598 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 Z82210.1-201ENST00000440037 231 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 RPS29P31-201ENST00000446147 164 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 TPT1P12-201ENST00000448968 492 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC233279.1-201ENST00000455300 423 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC087884.1-201ENST00000469738 328 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 RPS4XP13-201ENST00000483219 789 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC022493.1-201ENST00000492984 337 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 RPL30P5-201ENST00000494923 336 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 MTND3P25-201ENST00000509243 135 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC108043.1-201ENST00000512696 574 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC053481.4-201ENST00000583164 216 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 MIR378J-201ENST00000611988 109 ntBASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1LQ96KA5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 AL672296.1-201ENST00000427780 2158 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 Y_RNA.33-201ENST00000362591 102 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 RNU1-32P-201ENST00000363937 159 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 RNU6-1303P-201ENST00000364841 107 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 RNU2-37P-201ENST00000410695 177 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 RNU6-607P-201ENST00000411283 108 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 AL353621.1-201ENST00000418219 243 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 AC092047.1-201ENST00000424997 240 ntBASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1LQ96KA5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms