Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PDCL2P1-201ENST00000419302 352 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC137499.1-201ENST00000427602 88 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC093106.2-201ENST00000428212 385 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC079781.2-201ENST00000446424 169 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC140076.1-201ENST00000449897 361 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC078785.3-201ENST00000476607 425 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 EIF4EP3-201ENST00000498782 656 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 GMPSP1-201ENST00000514075 579 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 SNORD27.1-201ENST00000516319 72 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 HMGB1P41-201ENST00000520234 440 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 CR383656.7-201ENST00000548164 174 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP4Q96DX8 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AC091903.1-201ENST00000624322 454 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTP4Q96DX8 AP001486.2-201ENST00000561652 5113 ntBASIC3.3□□□□□ -1.88
RTP4Q96DX8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTP4Q96DX8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTP4Q96DX8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTP4Q96DX8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTP4Q96DX8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 RNU6-188P-201ENST00000364207 107 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 Y_RNA.255-201ENST00000364581 97 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 RNU6-996P-201ENST00000365438 107 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 RNU6-629P-201ENST00000384061 103 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 Y_RNA.509-201ENST00000384506 99 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 Y_RNA.529-201ENST00000384586 119 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 MIR558-201ENST00000384920 94 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 SNORA48.2-201ENST00000390926 124 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 UBE2V1P2-201ENST00000397758 440 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 CALM1P1-201ENST00000442082 433 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC073415.1-201ENST00000449240 153 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC108059.3-201ENST00000456388 214 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 RPS29P15-201ENST00000458329 171 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 RNU7-59P-201ENST00000459101 61 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC093278.1-201ENST00000494700 600 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC010486.1-201ENST00000511793 424 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 GLYCAM1-201ENST00000546596 285 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC006270.2-201ENST00000578523 652 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 MIR4719-201ENST00000585233 84 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC018638.8-201ENST00000588755 281 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 SNRPGP15-201ENST00000600149 222 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC004908.2-201ENST00000609090 574 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 DISC2.1-201ENST00000612827 205 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC100810.6-201ENST00000638068 285 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP4Q96DX8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC004972.1-201ENST00000623934 2209 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 AC244517.1-201ENST00000606030 2086 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.29□□□□□ -1.88
RTP4Q96DX8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTP4Q96DX8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTP4Q96DX8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 NACAP2-201ENST00000318548 624 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 Y_RNA.263-201ENST00000364659 114 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 RNU4-20P-201ENST00000365601 151 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 MIR135A2-201ENST00000384854 100 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 RNU6-332P-201ENST00000391193 108 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 RNU2-62P-201ENST00000410868 191 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 RNU6-516P-201ENST00000411381 104 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 AL513185.2-201ENST00000425543 193 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 AC005094.1-201ENST00000440420 368 ntBASIC3.28□□□□□ -1.88
RTP4Q96DX8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.28□□□□□ -1.88
RTP4Q96DX8 AL356010.1-201ENST00000456364 102 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms