Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AL513043.1-201ENST00000439124 535 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RPS15AP7-201ENST00000439294 405 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 UBE2D3P4-201ENST00000441973 436 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 VN1R34P-201ENST00000447387 883 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RPL27AP5-201ENST00000469428 449 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC003982.1-202ENST00000469928 248 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC114786.4-201ENST00000508771 728 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC118465.1-201ENST00000513820 1271 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC114797.1-201ENST00000514003 728 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC007834.2-201ENST00000536310 343 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 MYL12BP1-201ENST00000569826 507 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AF131215.7-201ENST00000602443 707 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 U73023.1-201ENST00000603134 700 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC015871.2-201ENST00000603605 948 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC098826.3-201ENST00000603823 466 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AL137843.1-201ENST00000605078 385 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC091304.9-201ENST00000612091 226 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AL161629.2-201ENST00000615347 275 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC084757.4-201ENST00000616350 526 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC108479.2-201ENST00000617314 601 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC026422.1-201ENST00000623961 452 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 SNORA38.1-201ENST00000364172 131 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RNU6-851P-201ENST00000384565 107 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC137499.1-201ENST00000427602 88 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 YME1L1P1-201ENST00000429435 297 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC022018.1-201ENST00000430685 241 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 SNRPEP9-201ENST00000436794 238 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 USP9YP15-201ENST00000442391 422 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 SSXP1-201ENST00000453640 473 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RNA5SP269-201ENST00000459032 137 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RN7SL807P-201ENST00000470923 297 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 MTND3P7-201ENST00000474435 343 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RN7SL504P-201ENST00000494496 287 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC117522.3-201ENST00000507974 584 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RNA5SP290-201ENST00000517133 127 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC009812.2-201ENST00000517657 457 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 OSBPL9P5-201ENST00000542581 171 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 RPL21P5-201ENST00000554662 472 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 MIR5004-201ENST00000579078 107 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 Z94722.1-201ENST00000604328 474 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AL161756.2-201ENST00000604597 246 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC121247.2-201ENST00000604776 136 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AP000860.1-201ENST00000605250 559 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AL365204.3-201ENST00000612448 685 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC007494.3-201ENST00000624660 743 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 AC110079.1-202ENST00000635213 138 ntBASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RPUSD4Q96CM3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 SNORA54-201ENST00000384281 123 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 MT-TH-201ENST00000387441 69 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AF228730.1-201ENST00000397972 663 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 RNU2-36P-201ENST00000410361 191 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 NPM1P11-201ENST00000417106 855 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 HMGB1P9-201ENST00000429856 646 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 AC010153.1-201ENST00000432862 727 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 ARPC3P1-201ENST00000437218 533 ntBASIC2.18□□□□□ -2.06
RPUSD4Q96CM3 CYCSP32-201ENST00000440548 321 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms