Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL137843.1-201ENST00000605078 385 ntBASIC3.35□□□□□ -1.87
SKA1Q96BD8 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.35□□□□□ -1.87
SKA1Q96BD8 AL162274.2-201ENST00000614406 332 ntBASIC3.35□□□□□ -1.87
SKA1Q96BD8 AL603839.4-201ENST00000624658 1005 ntBASIC3.35□□□□□ -1.87
SKA1Q96BD8 ADAM3A-203ENST00000461344 2157 ntBASIC3.35□□□□□ -1.87
SKA1Q96BD8 AL353743.1-202ENST00000431724 1695 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 SNORA40.3-201ENST00000390964 122 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 RPS3AP36-201ENST00000398190 775 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AL512633.1-201ENST00000399931 655 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AC127391.1-201ENST00000411737 98 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AC080125.1-201ENST00000414888 684 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 UBBP3-201ENST00000445497 241 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 RNA5SP269-201ENST00000459032 137 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AC139453.3-201ENST00000493276 369 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 RNU2-46P-201ENST00000517038 113 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SKA1Q96BD8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SKA1Q96BD8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.34□□□□□ -1.87
SKA1Q96BD8 AC091304.9-201ENST00000612091 226 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 AL133173.2-201ENST00000614270 90 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 U6.99-201ENST00000637524 83 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SKA1Q96BD8 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.87
SKA1Q96BD8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SKA1Q96BD8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC010889.1-201ENST00000566193 2666 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SKA1Q96BD8 FGF7P2-201ENST00000332473 296 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 SNORA20.2-201ENST00000383922 131 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 SNORD116-8-201ENST00000384365 95 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 U3.26-201ENST00000391236 204 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 RN7SKP123-201ENST00000410732 291 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 Z99755.1-201ENST00000414048 380 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 AL591704.1-201ENST00000432574 275 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 RPL36AP6-201ENST00000435770 321 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 OSTCP8-201ENST00000445117 448 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AL136380.1-201ENST00000447970 162 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 FABP5P13-201ENST00000452144 328 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 RNU6-914P-201ENST00000516749 109 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 AP003122.3-201ENST00000526316 255 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC084851.1-201ENST00000529105 249 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC007151.1-201ENST00000572774 483 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC015917.1-201ENST00000579654 510 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC024619.4-201ENST00000580924 316 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC015871.2-201ENST00000603605 948 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 Z94722.1-201ENST00000604328 474 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC130324.3-201ENST00000614165 542 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AP001506.1-201ENST00000615444 211 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 AL356321.1-201ENST00000621360 228 ntBASIC3.33□□□□□ -1.88
SKA1Q96BD8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SKA1Q96BD8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA1Q96BD8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKA1Q96BD8 U3.6-201ENST00000363622 211 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 SNORD56.5-201ENST00000364281 72 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 SNORA68.1-201ENST00000364537 132 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 RNY4P34-201ENST00000364779 95 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SKA1Q96BD8 MIR627-201ENST00000384979 97 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 FO393413.1-201ENST00000402892 195 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 SNORA11.2-201ENST00000408318 127 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.32□□□□□ -1.88
SKA1Q96BD8 MED13P1-201ENST00000428342 171 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA1Q96BD8 RPL23AP30-201ENST00000432419 501 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKA1Q96BD8 BRK1P2-201ENST00000442875 223 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA1Q96BD8 HMGN2P10-201ENST00000448085 265 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 AC115115.1-201ENST00000449927 248 ntBASIC3.32□□□□□ -1.88
SKA1Q96BD8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.32□□□□□ -1.88
SKA1Q96BD8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms