Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RNA5SP50-201ENST00000363731 107 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RNU6-701P-201ENST00000384059 107 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MIR490-201ENST00000384865 128 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AL645937.1-202ENST00000421799 937 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AL589872.1-201ENST00000426602 288 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC010975.2-201ENST00000427781 588 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 SNRPEP9-201ENST00000436794 238 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 ARPC3P1-201ENST00000437218 533 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 RPS12P18-201ENST00000442381 270 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MTCO2P3-201ENST00000442543 421 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MTND6P13-201ENST00000443510 523 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MTCYBP1-201ENST00000454315 1119 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RPL12P25-201ENST00000455592 494 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RNA5SP269-201ENST00000459032 137 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RPL21P10-201ENST00000463521 490 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RPL37P25-201ENST00000507308 276 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 RNU6-405P-201ENST00000516637 110 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC016957.1-201ENST00000534895 309 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AL359212.1-201ENST00000556608 614 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MTCO3P13-201ENST00000577757 781 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 BNIP3P8-201ENST00000597863 560 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 RPL23AP78-201ENST00000599928 470 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AP003465.2-201ENST00000602571 373 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC007363.1-201ENST00000604736 620 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 U3.45-201ENST00000607547 219 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC068944.2-201ENST00000610373 403 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AL359198.2-201ENST00000611836 194 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC108479.2-201ENST00000617314 601 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC068880.5-201ENST00000624331 290 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFT1Q96AA3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFT1Q96AA3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 RNU5E-1-201ENST00000362477 120 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 RNU6-960P-201ENST00000364056 120 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 SMIM11P1-201ENST00000369586 178 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 RNU6-297P-201ENST00000384636 107 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 MRPL42P2-201ENST00000403169 426 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 HMGN1P14-201ENST00000412459 517 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC137499.1-201ENST00000427602 88 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 HMGB1P27-201ENST00000431429 603 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 CYCSP32-201ENST00000440548 321 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 USP9YP15-201ENST00000442391 422 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 NEFMP1-201ENST00000443423 1006 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC093899.1-201ENST00000457984 376 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AIG1P1-201ENST00000503376 148 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC020895.1-201ENST00000595362 272 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC068276.1-201ENST00000605793 379 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC087241.4-201ENST00000612441 480 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC110079.1-202ENST00000635213 138 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 U2.21-201ENST00000637295 81 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFT1Q96AA3 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
RFT1Q96AA3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFT1Q96AA3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFT1Q96AA3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RFT1Q96AA3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFT1Q96AA3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RFT1Q96AA3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms