Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC034102.8-201ENST00000615146 484 ntBASIC3.33□□□□□ -1.88
SMARCE1Q969G3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.33□□□□□ -1.88
SMARCE1Q969G3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCE1Q969G3 FRG1KP-201ENST00000623592 341 ntBASIC3.33□□□□□ -1.88
SMARCE1Q969G3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SMARCE1Q969G3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SMARCE1Q969G3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.33□□□□□ -1.88
SMARCE1Q969G3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
SMARCE1Q969G3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 RNU6-946P-201ENST00000383878 107 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 RNA5SP252-201ENST00000391131 119 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 TPTE2P5-203ENST00000458118 728 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC087588.1-201ENST00000462203 316 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC007182.2-201ENST00000489251 402 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AP002812.1-201ENST00000495378 474 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC138853.1-201ENST00000503549 823 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 MTND2P33-201ENST00000506452 1031 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 RN7SKP272-201ENST00000516988 232 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 SNORA31.26-201ENST00000517250 137 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 OR5B19P-201ENST00000531766 928 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC034105.3-201ENST00000565294 442 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AMZ2P1-203ENST00000565833 850 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AL391840.1-201ENST00000571144 367 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AL121992.2-201ENST00000606262 256 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AL139286.2-201ENST00000606838 396 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC104073.3-201ENST00000610942 955 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC068137.4-201ENST00000638485 296 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.32□□□□□ -1.88
SMARCE1Q969G3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RNU6-181P-201ENST00000363225 107 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RNA5SP267-201ENST00000364893 126 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 SNORD116-4-201ENST00000384733 96 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RNA5SP120-201ENST00000410900 112 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC114491.1-201ENST00000416095 246 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC010975.2-201ENST00000427781 588 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 MED13P1-201ENST00000428342 171 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC133104.1-201ENST00000429100 218 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 SAR1AP4-201ENST00000429225 591 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 C1DP4-201ENST00000455429 424 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RNU6-420P-201ENST00000458780 107 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC117440.1-201ENST00000474107 571 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AL160314.1-201ENST00000490836 438 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC026427.2-201ENST00000506228 536 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 RNU6-445P-201ENST00000516949 107 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AP003392.2-201ENST00000527269 208 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC136601.2-201ENST00000604356 474 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AL161798.1-201ENST00000604630 131 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC245389.1-201ENST00000605141 529 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 NDUFA8P1-201ENST00000605525 367 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.31□□□□□ -1.88
SMARCE1Q969G3 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
SMARCE1Q969G3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCE1Q969G3 ASNSP3-201ENST00000451989 1306 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 UBE2L2-201ENST00000254302 429 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 SNORA63.1-201ENST00000362493 131 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 RNU6-623P-201ENST00000363143 105 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 RNU6-288P-201ENST00000363690 104 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 RNU6-512P-201ENST00000364438 103 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMARCE1Q969G3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 MIR887-201ENST00000401258 79 ntBASIC3.3□□□□□ -1.88
SMARCE1Q969G3 AC092809.3-201ENST00000415453 231 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms