Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRF1Q92994 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
BRF1Q92994 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRF1Q92994 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF1Q92994 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRF1Q92994 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BRF1Q92994 SNORA75B-201ENST00000384053 137 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 SNORD3H-201ENST00000384486 214 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AL139039.1-201ENST00000401900 692 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AL590704.1-201ENST00000402856 794 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.6□□□□□ -1.67
BRF1Q92994 AC080125.1-201ENST00000414888 684 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AL160275.3-201ENST00000423876 471 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 RPL21P23-201ENST00000446654 460 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.6□□□□□ -1.67
BRF1Q92994 AC110792.1-201ENST00000491826 472 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.6□□□□□ -1.67
BRF1Q92994 RNU6-1137P-201ENST00000517073 99 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 RNU6-1213P-201ENST00000517075 94 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.6□□□□□ -1.67
BRF1Q92994 AC100830.2-201ENST00000581636 240 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 AL132822.1-201ENST00000617063 513 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF1Q92994 MTND5P1-201ENST00000445440 1375 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
BRF1Q92994 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.6□□□□□ -1.67
BRF1Q92994 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
BRF1Q92994 PRO1804-201ENST00000623780 2050 ntBASIC4.6□□□□□ -1.67
BRF1Q92994 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF1Q92994 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 SPRR2C-201ENST00000290702 219 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 AL356057.3-201ENST00000402607 340 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 RPL21P109-201ENST00000422213 475 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 RPL7P37-201ENST00000425095 738 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF1Q92994 AL365440.1-201ENST00000436135 2167 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 AL162151.2-201ENST00000448875 158 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF1Q92994 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 RPL37P6-201ENST00000460682 294 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC087884.1-201ENST00000469738 328 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 RPL31P60-201ENST00000478450 367 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 PPIAP15-201ENST00000479662 484 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 AC026801.1-201ENST00000497178 464 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.59□□□□□ -1.67
BRF1Q92994 Y_RNA.708-201ENST00000516950 96 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.59□□□□□ -1.67
BRF1Q92994 AC087854.1-201ENST00000519706 414 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.59□□□□□ -1.67
BRF1Q92994 RNU6-323P-201ENST00000521915 107 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF1Q92994 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.59□□□□□ -1.67
BRF1Q92994 AL360157.1-201ENST00000565962 87 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF1Q92994 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF1Q92994 BDH2P1-201ENST00000602288 736 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 AL121655.1-201ENST00000605811 308 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF1Q92994 AC083806.3-201ENST00000614016 455 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 AC103858.2-201ENST00000621471 543 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 PLCE1P1-201ENST00000622094 305 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 MIR6500-201ENST00000622700 86 ntBASIC4.59□□□□□ -1.67
BRF1Q92994 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF1Q92994 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BRF1Q92994 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRF1Q92994 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BRF1Q92994 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF1Q92994 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF1Q92994 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
BRF1Q92994 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF1Q92994 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRF1Q92994 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF1Q92994 Y_RNA.158-201ENST00000363651 101 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 RNU6-371P-201ENST00000364283 108 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 SNORA70.2-201ENST00000364506 135 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 Y_RNA.252-201ENST00000364556 101 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 RNU6-1032P-201ENST00000384100 107 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF1Q92994 RPS12P24-201ENST00000412619 387 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF1Q92994 AL117339.2-201ENST00000430475 180 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AL591212.2-201ENST00000433923 257 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 SNRPEP4-201ENST00000435815 279 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 HIGD1AP11-201ENST00000438361 280 ntBASIC4.58□□□□□ -1.68
BRF1Q92994 AL359672.1-201ENST00000442302 409 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms