Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 IGKV2D-23-201ENST00000518179 286 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 PSMA2P1-201ENST00000526365 646 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTF1Q92541 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTF1Q92541 AC126177.3-201ENST00000551839 688 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RPS3AP23-202ENST00000574601 686 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.44□□□□□ -1.7
RTF1Q92541 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.44□□□□□ -1.7
RTF1Q92541 AC090617.10-201ENST00000624308 134 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.44□□□□□ -1.7
RTF1Q92541 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.44□□□□□ -1.7
RTF1Q92541 U6.114-201ENST00000636407 96 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTF1Q92541 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.43□□□□□ -1.7
RTF1Q92541 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RTF1Q92541 RNU4-73P-201ENST00000363164 141 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 RNA5SP197-201ENST00000363357 119 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 Y_RNA.529-201ENST00000384586 119 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 Y_RNA.535-201ENST00000384612 99 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 RNU6-387P-201ENST00000411331 105 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.43□□□□□ -1.7
RTF1Q92541 Z99755.1-201ENST00000414048 380 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC007390.1-201ENST00000415722 356 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 RPS12P23-201ENST00000419579 400 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 DUTP6-201ENST00000425573 462 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC090774.1-201ENST00000435925 246 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.43□□□□□ -1.7
RTF1Q92541 AC022690.1-201ENST00000526681 550 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.43□□□□□ -1.7
RTF1Q92541 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.43□□□□□ -1.7
RTF1Q92541 AL121576.1-201ENST00000556055 276 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.43□□□□□ -1.7
RTF1Q92541 AC037471.2-201ENST00000564941 598 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.43□□□□□ -1.7
RTF1Q92541 AC110741.2-201ENST00000605278 268 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 RNU6-89P-201ENST00000606519 100 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AL450472.3-201ENST00000615578 367 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.43□□□□□ -1.7
RTF1Q92541 AC011155.2-201ENST00000623202 216 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC025034.2-201ENST00000623264 286 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 AC112487.2-201ENST00000637950 304 ntBASIC4.43□□□□□ -1.7
RTF1Q92541 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTF1Q92541 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTF1Q92541 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTF1Q92541 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RTF1Q92541 SNORA38.1-201ENST00000364172 131 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 RNU6-188P-201ENST00000364207 107 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 RNU6-61P-201ENST00000365528 109 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 SNORA24.1-201ENST00000384401 135 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.42□□□□□ -1.7
RTF1Q92541 OR6C66P-201ENST00000414917 930 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.42□□□□□ -1.7
RTF1Q92541 AL365400.1-201ENST00000431854 640 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.42□□□□□ -1.7
RTF1Q92541 AC004866.2-201ENST00000438285 481 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 RPL21P13-201ENST00000488305 481 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.42□□□□□ -1.7
RTF1Q92541 RNU6-1314P-201ENST00000517139 104 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.42□□□□□ -1.7
RTF1Q92541 AC087241.2-201ENST00000535801 324 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 AC078814.3-201ENST00000553036 491 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 MIR4424-201ENST00000585257 86 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.42□□□□□ -1.7
RTF1Q92541 AC009248.2-201ENST00000619826 254 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 AC110801.1-201ENST00000623590 212 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.42□□□□□ -1.7
RTF1Q92541 MIR3651-201ENST00000630427 90 ntBASIC4.42□□□□□ -1.7
RTF1Q92541 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RTF1Q92541 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTF1Q92541 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RTF1Q92541 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.41□□□□□ -1.7
RTF1Q92541 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.41□□□□□ -1.7
RTF1Q92541 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RTF1Q92541 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RTF1Q92541 Y_RNA.100-201ENST00000363141 102 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 SNORD115-7-201ENST00000365306 82 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 RNU4-20P-201ENST00000365601 151 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 RNU6-38P-201ENST00000384085 107 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AL356432.1-201ENST00000405809 419 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AL606923.1-201ENST00000406616 190 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC114491.1-201ENST00000416095 246 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 ARL5AP1-201ENST00000418991 388 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 PPP1R11P2-201ENST00000423543 382 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 MTND1P14-201ENST00000427400 950 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 TAAR7P-201ENST00000436141 242 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 GAPDHP27-201ENST00000447427 1020 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AL118520.1-201ENST00000450770 291 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 RNU6-333P-201ENST00000459117 107 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC010631.1-201ENST00000474150 156 ntBASIC4.41□□□□□ -1.7
RTF1Q92541 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.41□□□□□ -1.7
RTF1Q92541 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms