Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HIF1AP1-201ENST00000553642 175 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AC068944.2-201ENST00000610373 403 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 FTX_3.1-201ENST00000610451 147 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AL138880.2-201ENST00000616214 239 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 PLCE1P1-201ENST00000622094 305 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AC024940.5-201ENST00000622889 474 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AL354685.2-201ENST00000448218 1447 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 ZNF285B-201ENST00000561698 1767 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 AC007656.2-201ENST00000624902 4547 ntBASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.25□□□□□ -1.89
RAB40AQ8WXH6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 Y_RNA.256-201ENST00000364594 104 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 SNORA4.3-201ENST00000365564 137 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AL606923.1-201ENST00000406616 190 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 RNU6ATAC-201ENST00000408749 126 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC063979.1-201ENST00000415539 377 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 RPL23AP82-202ENST00000427528 469 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 GTF2IP20-201ENST00000431663 360 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC000111.3-201ENST00000433478 193 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 RPL12P25-201ENST00000455592 494 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 RNU1-45P-201ENST00000517191 141 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AL157871.3-201ENST00000557231 293 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 SNORA59B-202ENST00000578183 701 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC007014.2-201ENST00000615581 479 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC010338.1-201ENST00000621823 717 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC099506.2-201ENST00000623074 221 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AL732372.2-225ENST00000642124 456 ntBASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
RAB40AQ8WXH6 AC005183.1-201ENST00000603687 1979 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 NACAP2-201ENST00000318548 624 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 Y_RNA.89-201ENST00000363031 102 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RNU6-877P-201ENST00000383868 107 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 MIR30B-201ENST00000384850 88 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 MIR591-201ENST00000385290 95 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RNA5SP424-201ENST00000390988 115 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 SNORA48.7-201ENST00000391302 135 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL354719.1-201ENST00000406535 843 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RNU6-908P-201ENST00000410160 94 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RNU6-55P-201ENST00000411092 107 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RNU6-954P-201ENST00000411355 107 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL158156.1-201ENST00000422509 473 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL139415.2-201ENST00000431968 163 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RAC1P2-201ENST00000511164 579 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 RNA5SP208-201ENST00000516156 78 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AP001094.1-201ENST00000579805 193 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL356321.1-201ENST00000621360 228 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 AL357559.1-201ENST00000622228 274 ntBASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms