Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP38Q8NB14 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP38Q8NB14 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.6□□□□□ -1.83
USP38Q8NB14 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP38Q8NB14 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
USP38Q8NB14 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.6□□□□□ -1.83
USP38Q8NB14 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.6□□□□□ -1.83
USP38Q8NB14 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
USP38Q8NB14 RNU6-169P-201ENST00000365336 107 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 RNU6-282P-201ENST00000365357 103 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 RNU5E-6P-201ENST00000365574 115 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 RNU6-456P-201ENST00000384493 107 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 Y_RNA.582-201ENST00000391023 95 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC126124.2-201ENST00000413542 321 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 MTND3P17-201ENST00000416968 344 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC245291.1-201ENST00000419501 328 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.6□□□□□ -1.83
USP38Q8NB14 TRIAP1P1-201ENST00000427062 225 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC133104.1-201ENST00000429100 218 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 HMGB1P27-201ENST00000431429 603 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 RPL23AP30-201ENST00000432419 501 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 HIGD1AP11-201ENST00000438361 280 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 NEFMP1-201ENST00000443423 1006 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 FDX1P2-201ENST00000450769 375 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.6□□□□□ -1.83
USP38Q8NB14 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC010493.1-201ENST00000513479 292 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 SCARNA24.1-201ENST00000516465 137 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 RNU6-1092P-201ENST00000516955 87 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.6□□□□□ -1.83
USP38Q8NB14 GTF3AP2-201ENST00000557014 266 ntBASIC3.6□□□□□ -1.83
USP38Q8NB14 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.6□□□□□ -1.83
USP38Q8NB14 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.6□□□□□ -1.83
USP38Q8NB14 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
USP38Q8NB14 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.59□□□□□ -1.83
USP38Q8NB14 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
USP38Q8NB14 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 CUL1P1-201ENST00000509510 2425 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 HSPE1P11-201ENST00000339579 310 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 RNU6-181P-201ENST00000363225 107 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 SNORD56.3-201ENST00000363507 71 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.59□□□□□ -1.83
USP38Q8NB14 RNU6-259P-201ENST00000383999 107 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AL353705.1-201ENST00000433468 480 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 PIGFP3-201ENST00000441918 722 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 CBWD4P-201ENST00000445695 655 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.59□□□□□ -1.83
USP38Q8NB14 ELOCP23-201ENST00000452014 332 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.59□□□□□ -1.83
USP38Q8NB14 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.59□□□□□ -1.83
USP38Q8NB14 RPL37P6-201ENST00000460682 294 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 TRBV12-1-201ENST00000479785 344 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 KCTD9P5-201ENST00000504141 1170 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC091826.1-201ENST00000514065 313 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 RNU6-445P-201ENST00000516949 107 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC022880.1-201ENST00000534017 973 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 MIR4435-1-201ENST00000582552 80 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AC098848.2-201ENST00000588023 330 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.59□□□□□ -1.83
USP38Q8NB14 AC012557.2-201ENST00000605919 418 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AL390240.1-201ENST00000612950 384 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AC015540.1-201ENST00000615828 501 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AC002076.2-201ENST00000617362 122 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 AC084035.1-201ENST00000634543 607 ntBASIC3.59□□□□□ -1.83
USP38Q8NB14 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP38Q8NB14 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
USP38Q8NB14 AC004972.1-201ENST00000623934 2209 ntBASIC3.59□□□□□ -1.84
USP38Q8NB14 CR848007.1-201ENST00000442354 1699 ntBASIC3.59□□□□□ -1.84
USP38Q8NB14 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP38Q8NB14 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.58□□□□□ -1.84
USP38Q8NB14 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.58□□□□□ -1.84
USP38Q8NB14 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP38Q8NB14 RNA5SP383-201ENST00000362934 120 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AC010975.2-201ENST00000427781 588 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 OR2AS1P-201ENST00000427827 319 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms