Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 Y_RNA.408-201ENST00000383987 102 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 SNORA40.2-201ENST00000390847 128 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 RNU4-72P-201ENST00000410754 173 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 UBE2FP1-201ENST00000416536 447 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 SRIP2-201ENST00000428470 166 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 MICF-203ENST00000432679 129 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 SNRPEP7-201ENST00000438350 220 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 IPO7P1-201ENST00000442031 636 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 IFNA11P-201ENST00000446352 526 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 MTND1P31-201ENST00000449206 961 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 RPS27AP10-201ENST00000496103 208 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC024589.1-201ENST00000512207 263 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 RNY4P37-201ENST00000516225 96 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AP005902.1-201ENST00000521358 186 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 DEFB131D-201ENST00000526803 184 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC118942.1-201ENST00000529674 1035 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC010186.2-204ENST00000537668 439 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC009127.3-201ENST00000570531 403 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 MIR5571-201ENST00000577998 113 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC024619.4-201ENST00000580924 316 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC002984.1-201ENST00000591692 448 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC068620.3-201ENST00000602749 560 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC107308.1-201ENST00000615897 301 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.13
ZIC4Q8N9L1 AL109809.4-201ENST00000603520 2185 ntBASIC1.78□□□□□ -2.13
ZIC4Q8N9L1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 MTND5P30-201ENST00000452896 1731 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC011477.1-204ENST00000623416 1325 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 HSPE1P11-201ENST00000339579 310 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 Y_RNA.245-201ENST00000364493 95 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 RNU6-253P-201ENST00000384730 105 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 COX7BP2-201ENST00000437976 242 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 MTATP6P7-201ENST00000453315 681 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AL121769.1-201ENST00000469473 401 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 SCARNA3-201ENST00000517097 143 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC092451.2-201ENST00000538746 658 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 CYCSP2-201ENST00000558168 301 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AGGF1P5-201ENST00000567900 919 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AL391813.1-201ENST00000603098 260 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC004805.2-201ENST00000605382 482 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AL021997.1-201ENST00000605757 193 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC010678.1-201ENST00000614118 713 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 AC099063.3-201ENST00000642066 185 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 MTND5P29-201ENST00000458676 1807 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 ZNF355P-201ENST00000427301 3216 ntBASIC1.77□□□□□ -2.13
ZIC4Q8N9L1 MTND4P1-201ENST00000457501 1466 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 OR56A5-201ENST00000340110 738 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RNA5SP88-201ENST00000365560 109 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 MIR218-1-201ENST00000384999 110 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RNU4-26P-201ENST00000410270 107 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC069282.1-201ENST00000411911 526 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RPL26P27-201ENST00000414397 437 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 CYCSP48-201ENST00000417124 323 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 MTCO3P45-201ENST00000443036 613 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RNU6-717P-201ENST00000459076 104 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RPL38P4-201ENST00000502376 214 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 MTND5P13-201ENST00000513046 1079 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RNU6-927P-201ENST00000516199 100 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RNU6-390P-201ENST00000516259 103 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms