Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 Y_RNA.9-201ENST00000362354 101 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 U3.26-201ENST00000391236 204 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC063979.1-201ENST00000415539 377 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 MTCYBP5-201ENST00000423752 1135 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 BX679664.1-201ENST00000434429 253 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 RPL36AP6-201ENST00000435770 321 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 SNORA70.19-201ENST00000516717 90 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 RN7SKP289-201ENST00000517244 295 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.59□□□□□ -1.83
VPS52Q8N1B4 HMGB1P41-201ENST00000520234 440 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC093331.1-201ENST00000521474 169 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AK6P1-201ENST00000540219 478 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AL157687.1-201ENST00000554853 619 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC012507.3-201ENST00000603556 477 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AP001330.4-201ENST00000604350 154 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC007363.1-201ENST00000604736 620 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC099778.2-201ENST00000610904 211 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 AC139792.3-201ENST00000623525 224 ntBASIC3.59□□□□□ -1.83
VPS52Q8N1B4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
VPS52Q8N1B4 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC073343.1-201ENST00000328239 651 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.367-201ENST00000365544 101 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.372-201ENST00000365599 102 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.450-201ENST00000384198 113 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 MIR1-2-201ENST00000384961 85 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 RNU6-780P-201ENST00000391030 104 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL590002.1-201ENST00000406554 418 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 RNA5SP129-201ENST00000410276 118 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 RAC1P6-201ENST00000423911 575 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 S100A11P2-201ENST00000467589 312 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL121769.1-201ENST00000469473 401 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC126389.1-201ENST00000477436 290 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 RN7SL432P-201ENST00000484057 298 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 OR5BN1P-201ENST00000532955 829 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 HMGB1P6-201ENST00000569046 646 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC005951.2-201ENST00000576282 495 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 MIR3921-201ENST00000577308 85 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 BDH2P1-201ENST00000602288 736 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.6-201ENST00000603753 252 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.11-201ENST00000604059 253 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC008162.1-201ENST00000604718 254 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.1-201ENST00000604752 252 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL137843.1-201ENST00000605078 385 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.5-201ENST00000605253 252 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.12-201ENST00000605291 253 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.8-201ENST00000605353 252 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL670379.7-201ENST00000605823 252 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AL121992.2-201ENST00000606262 256 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AC010133.1-201ENST00000615809 842 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
VPS52Q8N1B4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS52Q8N1B4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 RNU6-1085P-201ENST00000363576 107 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 RNY4P14-201ENST00000363656 96 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.409-201ENST00000383990 98 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.481-201ENST00000384373 102 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 RNU6-606P-201ENST00000384721 111 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 RNU2-39P-201ENST00000410604 198 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 RNU4-47P-201ENST00000410876 114 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 ZNF90P2-204ENST00000419323 1075 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AC000111.3-201ENST00000433478 193 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AC020550.1-201ENST00000447385 163 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms