Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2□□□□□ -2.09
COL27A1Q8IZC6 MIR7844-201ENST00000616161 122 ntBASIC2□□□□□ -2.09
COL27A1Q8IZC6 AC019226.2-201ENST00000625973 424 ntBASIC2□□□□□ -2.09
COL27A1Q8IZC6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2□□□□□ -2.09
COL27A1Q8IZC6 AC006927.3-201ENST00000638789 384 ntBASIC2□□□□□ -2.09
COL27A1Q8IZC6 OR5H6-203ENST00000642105 978 ntBASIC2□□□□□ -2.09
COL27A1Q8IZC6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2□□□□□ -2.09
COL27A1Q8IZC6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL27A1Q8IZC6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL27A1Q8IZC6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 MIR6073-201ENST00000352083 89 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNY4P24-201ENST00000362735 96 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU1-17P-201ENST00000363022 152 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU6-1155P-201ENST00000363554 107 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU6-799P-201ENST00000363567 107 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 MIR325-201ENST00000385260 98 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 SAR1AP2-201ENST00000392696 594 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 MIR1284-201ENST00000408337 120 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL359704.1-201ENST00000411586 781 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC098592.1-201ENST00000419352 333 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL445646.1-201ENST00000431784 216 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RPS25P9-201ENST00000435591 252 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL590664.1-201ENST00000448065 339 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC104308.1-201ENST00000454621 333 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AP1S2P1-201ENST00000457344 379 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC091179.1-201ENST00000461606 579 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC022447.3-201ENST00000506865 495 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 MRPS36P5-201ENST00000551909 298 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL627309.6-201ENST00000606857 840 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC009570.1-201ENST00000609599 745 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL137847.3-201ENST00000611521 109 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC017037.3-201ENST00000625016 472 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 FCF1P10-201ENST00000407590 479 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 Y_RNA.595-201ENST00000410403 105 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RPL27AP8-201ENST00000424277 446 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL592045.1-201ENST00000429867 352 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC109583.1-201ENST00000432156 268 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 SSXP4-201ENST00000451349 245 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RPL23AP35-201ENST00000451906 501 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AP000705.1-201ENST00000454567 350 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL139824.2-201ENST00000458731 1095 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC093809.1-201ENST00000509155 340 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU6-150P-201ENST00000516237 95 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU6-1256P-201ENST00000516539 103 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU6-295P-201ENST00000516901 104 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 RNU6-548P-201ENST00000517083 115 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AP000907.2-201ENST00000530827 353 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 ZNF321P-202ENST00000550843 495 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AMZ2P1-203ENST00000565833 850 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 ISCA1P3-201ENST00000577104 373 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL596327.1-201ENST00000603629 213 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 Z99497.2-201ENST00000603634 310 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 MTND4LP5-201ENST00000605152 292 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC244517.12-201ENST00000623581 663 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AP003122.6-201ENST00000623831 495 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AC097520.1-201ENST00000624435 385 ntBASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.99□□□□□ -2.09
COL27A1Q8IZC6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 AC010680.1-201ENST00000590024 3590 ntBASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 RNU5A-1-201ENST00000362698 116 ntBASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 RNU6-744P-201ENST00000365557 107 ntBASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 RNU6-1316P-201ENST00000384242 108 ntBASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 AL590084.2-201ENST00000401481 382 ntBASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 Z82205.1-201ENST00000428456 297 ntBASIC1.98□□□□□ -2.09
COL27A1Q8IZC6 AL512286.1-201ENST00000439244 400 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms