Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AP001029.2-203ENST00000589795 4910 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.127-201ENST00000363386 109 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 MIR10B-201ENST00000385011 110 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AL357075.1-201ENST00000404107 726 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 RNU4-34P-201ENST00000410431 124 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC079780.1-201ENST00000428259 207 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AL078601.1-201ENST00000444542 271 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 NUTF2P7-201ENST00000453086 375 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 RPS27AP9-201ENST00000477681 438 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC139453.3-201ENST00000493276 369 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 snoU18.1-201ENST00000629629 71 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC010332.2-201ENST00000613083 1904 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 AC112198.2-201ENST00000426589 6996 ntBASIC5.07□□□□□ -1.6
CCDC116Q8IYX3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 ZNF204P-201ENST00000416749 2397 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNA5SP197-201ENST00000363357 119 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNA5SP234-201ENST00000363916 119 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.238-201ENST00000364441 102 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 SNORA40-201ENST00000388090 126 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 SNORA17A-201ENST00000391185 133 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNU2-2P-201ENST00000410396 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 EIF1AXP1-201ENST00000419267 435 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC010154.1-201ENST00000425857 269 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC100832.1-201ENST00000471945 383 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RPS20P22-201ENST00000473700 357 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RN7SL466P-201ENST00000497546 295 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNU6-1333P-201ENST00000516162 93 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNA5SP290-201ENST00000517133 127 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AL391261.3-201ENST00000557194 520 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 TGIF1P1-201ENST00000558095 802 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC233702.2-202ENST00000562547 291 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC055872.1-201ENST00000570978 278 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 SNORD95-201ENST00000579879 68 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 SNORD84-203ENST00000584275 78 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC005176.2-201ENST00000596933 147 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNU2-4P-201ENST00000606190 192 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.15-201ENST00000611544 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 MIR6798-201ENST00000612887 67 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.16-201ENST00000613119 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.12-201ENST00000613778 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.9-201ENST00000615427 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.11-201ENST00000616345 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.2-201ENST00000616535 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC068831.7-201ENST00000616954 363 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.3-201ENST00000617785 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.19-201ENST00000618602 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNU2-1-201ENST00000618664 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.6-201ENST00000619225 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.5-201ENST00000619465 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 U2.10-201ENST00000620268 191 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 SNORA17.5-201ENST00000630429 132 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AC241585.2-209ENST00000638217 143 ntBASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC116Q8IYX3 AL353743.1-202ENST00000431724 1695 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 Y_RNA.218-201ENST00000364218 104 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 RNU6-1325P-201ENST00000364905 105 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 RNU6-281P-201ENST00000384212 103 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 MIR329-1-201ENST00000385028 80 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 SNORA40.19-201ENST00000390846 128 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.05□□□□□ -1.6
CCDC116Q8IYX3 RN7SKP293-201ENST00000411389 296 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms