Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AP002770.2-201ENST00000543613 532 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AC022662.1-201ENST00000580252 331 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AC090186.1-201ENST00000605991 572 ntBASIC2.19□□□□□ -2.06
CDKL3Q8IVW4 AP000776.1-201ENST00000530032 1663 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC106754.1-201ENST00000562632 1513 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 FAM133CP-201ENST00000332869 704 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 RNU6-637P-201ENST00000384050 107 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 RNU6-114P-201ENST00000384704 105 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 RSL24D1P4-201ENST00000400938 484 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC106883.1-201ENST00000418805 562 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 ZNF863P-201ENST00000426746 417 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 MTCO2P20-201ENST00000437339 673 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 COX7BP2-201ENST00000437976 242 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 FTH1P25-201ENST00000447665 469 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 USP9YP10-201ENST00000454868 628 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 RPS20P22-201ENST00000473700 357 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 RPL7P18-201ENST00000478965 734 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC135628.1-201ENST00000568867 534 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 MTCO2P2-201ENST00000591258 225 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 AL590808.1-201ENST00000618696 141 ntBASIC2.18□□□□□ -2.06
CDKL3Q8IVW4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 ELF2P3-201ENST00000445099 1506 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 RNU2-33P-201ENST00000410344 192 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 MTND1P23-201ENST00000416931 372 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 HMGB1P49-201ENST00000418882 569 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AL031659.1-201ENST00000447075 539 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 DUXAP8-207ENST00000456786 622 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 TRBV12-1-201ENST00000479785 344 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC093281.2-201ENST00000510153 597 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 RNU6-840P-201ENST00000517275 65 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 CYCSP26-201ENST00000534107 320 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC026464.5-201ENST00000562497 722 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC009063.1-201ENST00000563342 702 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC107214.2-201ENST00000608204 634 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC009974.1-201ENST00000608881 455 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC008498.1-201ENST00000613012 531 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 MTND4P27-201ENST00000450813 1354 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 AC092447.10-201ENST00000620607 1652 ntBASIC2.17□□□□□ -2.06
CDKL3Q8IVW4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 ELOCP9-201ENST00000418624 239 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 MTND3P1-201ENST00000441336 220 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 GPM6BP3-201ENST00000442797 145 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AL591719.1-201ENST00000444669 744 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 PAXBP1P1-201ENST00000449315 447 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 MTATP6P7-201ENST00000453315 681 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 RPS20P20-201ENST00000460498 340 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms