Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNU6-611P-201ENST00000384276 104 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 Y_RNA.478-201ENST00000384358 107 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RNA5SP397-201ENST00000391323 118 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RNU6-130P-201ENST00000411112 103 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RAC1P3-201ENST00000416129 580 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AL117339.3-201ENST00000418733 162 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AL160314.1-201ENST00000490836 438 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RPL36AP41-201ENST00000493820 306 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 FTH1P9-201ENST00000513251 355 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RNA5SP290-201ENST00000517133 127 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RNU6-111P-201ENST00000517179 105 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AC025755.1-201ENST00000521306 278 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AP001781.1-201ENST00000530977 207 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 MIR4277-201ENST00000578298 84 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 AL512605.2-201ENST00000592972 256 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RNA5SP108-201ENST00000605921 117 ntBASIC5.27□□□□□ -1.57
TRIM50Q86XT4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM50Q86XT4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AL731532.2-201ENST00000623542 1953 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 SNORD27-201ENST00000363981 72 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 SNORA62-201ENST00000365493 153 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 RNU6-121P-201ENST00000410525 99 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 Z85995.1-201ENST00000415547 335 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AL732292.1-201ENST00000426692 226 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 NDUFB1P2-201ENST00000449477 176 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 RNA5SP103-201ENST00000459503 118 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 RPS20P22-201ENST00000473700 357 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC098869.1-201ENST00000481627 292 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 RNU6-612P-201ENST00000516909 102 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AL355877.2-201ENST00000603670 358 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC008962.1-201ENST00000605729 304 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC009318.2-201ENST00000610917 651 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 Z75746.1-201ENST00000440243 2080 ntBASIC5.26□□□□□ -1.57
TRIM50Q86XT4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM50Q86XT4 AC093535.2-201ENST00000624769 2326 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 SNORD50.1-201ENST00000362987 71 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 Y_RNA.117-201ENST00000363294 101 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 U3.6-201ENST00000363622 211 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC068538.1-201ENST00000376856 336 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 Y_RNA.518-201ENST00000384552 113 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 RPL23AP25-201ENST00000430973 463 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AL627311.1-201ENST00000431514 115 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 TPT1P12-201ENST00000448968 492 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 RPL30P10-201ENST00000488148 337 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 RPL21P13-201ENST00000488305 481 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC073073.1-201ENST00000493920 463 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 RNU6-138P-201ENST00000515952 107 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC007458.1-201ENST00000542812 373 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 MIR4284-201ENST00000578924 81 ntBASIC5.25□□□□□ -1.57
TRIM50Q86XT4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM50Q86XT4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms