Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.57□□□□□ -2.16
LRRC28Q86X40 AC087821.2-201ENST00000637086 450 ntBASIC1.57□□□□□ -2.16
LRRC28Q86X40 AC007785.2-201ENST00000598627 1916 ntBASIC1.57□□□□□ -2.16
LRRC28Q86X40 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LRRC28Q86X40 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LRRC28Q86X40 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 RNU6-343P-201ENST00000364709 104 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AL079342.2-201ENST00000403367 482 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 RN7SKP158-201ENST00000410453 326 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 RNU6-1328P-201ENST00000410938 106 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC018630.2-202ENST00000422992 927 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 RPL17P35-201ENST00000432217 549 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 RPL7P54-201ENST00000438336 674 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC017099.1-201ENST00000448261 1028 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC079776.3-201ENST00000450665 370 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 DYNLL1P5-201ENST00000467158 270 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC007182.2-201ENST00000489251 402 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 RNU6-1256P-201ENST00000516539 103 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 MTCO3P15-201ENST00000526563 574 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC124947.2-202ENST00000552735 133 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 MIR4299-201ENST00000577899 72 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AP001429.1-201ENST00000602568 530 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC080013.4-201ENST00000607624 649 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 AC073592.7-201ENST00000623659 507 ntBASIC1.56□□□□□ -2.16
LRRC28Q86X40 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.56□□□□□ -2.16
LRRC28Q86X40 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 Y_RNA.25-201ENST00000362528 102 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 RNU5A-1-201ENST00000362698 116 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 RNU5E-8P-201ENST00000363502 116 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 RNU6-236P-201ENST00000363886 106 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 HMGB1P17-201ENST00000403495 628 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL161449.1-201ENST00000414531 1199 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 C1DP1-201ENST00000426049 402 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 GTF2IP7-202ENST00000436677 309 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL353689.1-201ENST00000438895 199 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC003989.2-201ENST00000440224 169 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 PIGFP3-201ENST00000441918 722 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 OFD1P3Y-201ENST00000453312 783 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 RPL7P18-201ENST00000478965 734 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC104685.1-201ENST00000502445 371 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 SUMO2P6-201ENST00000505273 288 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AP002748.2-201ENST00000528671 348 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AP003049.1-201ENST00000529418 457 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 HIGD1AP17-201ENST00000554576 276 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC015712.3-201ENST00000559380 164 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 RPP40P2-201ENST00000603596 712 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL390208.1-201ENST00000605885 644 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL583856.2-201ENST00000606298 543 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC004067.1-201ENST00000608733 700 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 MIR6845-201ENST00000613182 61 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC002550.2-201ENST00000621246 394 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC010329.5-201ENST00000623497 2174 ntBASIC1.55□□□□□ -2.16
LRRC28Q86X40 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LRRC28Q86X40 AC008555.8-201ENST00000623602 2168 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 RNA5SP276-201ENST00000362580 94 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 RNU4-42P-201ENST00000364738 142 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 MIR147B-201ENST00000390185 80 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 SNRPEP2-201ENST00000397592 279 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 AL109755.1-201ENST00000401791 649 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 USP9YP19-201ENST00000412165 485 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.54□□□□□ -2.16
LRRC28Q86X40 CCDC58P2-201ENST00000417131 366 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.54□□□□□ -2.16
LRRC28Q86X40 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.54□□□□□ -2.16
LRRC28Q86X40 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 Z82210.1-201ENST00000440037 231 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 MTND2P20-201ENST00000440805 661 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 RPL7P12-201ENST00000446719 750 ntBASIC1.54□□□□□ -2.16
LRRC28Q86X40 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.54□□□□□ -2.16
LRRC28Q86X40 RPL21P134-201ENST00000453468 483 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms