Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL358075.3-201ENST00000426289 226 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 MTND1P26-201ENST00000440488 538 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 SNRPGP9-201ENST00000456025 225 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC093899.1-201ENST00000457984 376 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 MTCO2P29-201ENST00000465212 189 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC128713.1-201ENST00000471495 306 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 RPL39P36-201ENST00000490784 156 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC009812.2-201ENST00000517657 457 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 NACAP3-201ENST00000552100 481 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AL359212.1-201ENST00000556608 614 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC010620.2-201ENST00000600135 313 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AL355598.1-201ENST00000604169 202 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC068276.1-201ENST00000605793 379 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC013562.2-201ENST00000611632 603 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 DUSP12P1-201ENST00000612874 516 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC090617.7-201ENST00000623952 126 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 AC019226.2-201ENST00000625973 424 ntBASIC3.12□□□□□ -1.91
PRPF39Q86UA1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF39Q86UA1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL137003.2-201ENST00000606924 2538 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 HSPE1P11-201ENST00000339579 310 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 RNU6-188P-201ENST00000364207 107 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 RNU1-73P-201ENST00000383971 164 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 SNORA54-201ENST00000384281 123 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 RNY3P10-201ENST00000384764 102 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 RPS12P24-201ENST00000412619 387 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 RPL26P27-201ENST00000414397 437 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL513477.1-202ENST00000417061 214 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 NPM1P11-201ENST00000417106 855 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 ISCA1P1-201ENST00000426679 387 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 HMGB1P9-201ENST00000429856 646 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL591212.2-201ENST00000433923 257 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 TAF9P1-201ENST00000445421 515 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 WASF1P1-201ENST00000447560 1131 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 FABP5P13-201ENST00000452144 328 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 FABP5P15-201ENST00000453566 214 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 TAF9P2-201ENST00000454958 515 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC080014.1-201ENST00000496877 1201 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 MRPS36P2-201ENST00000512569 299 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC119751.5-201ENST00000514077 770 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC090136.1-201ENST00000520009 240 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 HMGB1P41-201ENST00000520234 440 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AP003122.4-201ENST00000530980 758 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL358072.1-201ENST00000604156 575 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL137843.1-201ENST00000605078 385 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC025594.3-201ENST00000613068 790 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AC011939.3-201ENST00000613686 466 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 AL512643.1-201ENST00000635735 524 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
PRPF39Q86UA1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
PRPF39Q86UA1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC073343.1-201ENST00000328239 651 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RNU5E-1-201ENST00000362477 120 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RNY4P34-201ENST00000364779 95 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RNU6-190P-201ENST00000384154 102 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RNU6-658P-201ENST00000384606 106 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 RNU6-14P-201ENST00000384630 106 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AC127391.1-201ENST00000411737 98 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF39Q86UA1 HMGB3P12-201ENST00000438745 556 ntBASIC3.1□□□□□ -1.91
PRPF39Q86UA1 snoU109.1-201ENST00000459339 135 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms