Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 MAPK10-349ENST00000641767 3661 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AC007685.1-201ENST00000329806 452 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-37P-201ENST00000362692 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 Y_RNA.180-201ENST00000363867 113 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-11P-201ENST00000364234 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 SNORD14B-201ENST00000364533 90 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-7-201ENST00000364784 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-8-201ENST00000365467 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-25P-201ENST00000383873 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-1-201ENST00000383898 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-48P-201ENST00000384161 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-36P-201ENST00000384172 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-4P-201ENST00000384205 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-5P-201ENST00000384238 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-3P-201ENST00000384314 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-16P-201ENST00000384385 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-15P-201ENST00000384534 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-2-201ENST00000384627 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-29P-201ENST00000384637 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-9-201ENST00000384776 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 MIR1290-201ENST00000408735 78 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 SDAD1P3-201ENST00000427380 333 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 MTND5P15-201ENST00000434246 349 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RPS26P2-201ENST00000440331 348 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AC013470.1-201ENST00000453438 462 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 SNORA81.3-201ENST00000517283 198 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AL590705.4-201ENST00000532209 134 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AMZ2P1-203ENST00000565833 850 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 MIR4458-201ENST00000578872 75 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-6P-201ENST00000606623 107 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AP001282.2-201ENST00000616149 309 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AL731566.2-201ENST00000618971 317 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AC137590.2-201ENST00000619709 240 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 AL672167.1-203ENST00000641299 2975 ntBASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3DQ7Z6J8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 Y_RNA.29-201ENST00000362570 113 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 Y_RNA.84-201ENST00000363011 104 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 Y_RNA.623-201ENST00000411128 95 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL592148.1-201ENST00000413568 445 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL049745.1-201ENST00000433953 286 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL392103.1-201ENST00000447000 198 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL160314.1-201ENST00000490836 438 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC104164.2-201ENST00000496953 495 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC231760.1-201ENST00000498002 260 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 RNU4-71P-201ENST00000516258 113 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 RN7SKP92-201ENST00000517266 244 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 FTX_2.1-201ENST00000618816 94 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AC004925.1-201ENST00000624256 2706 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 AL136164.3-201ENST00000624429 3978 ntBASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3DQ7Z6J8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
UBE3DQ7Z6J8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms