Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 KATNBL1P6-201ENST00000453433 915 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AL031183.1-201ENST00000457667 207 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC104472.2-201ENST00000469035 601 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 SETP11-201ENST00000473027 690 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC022447.3-201ENST00000506865 495 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC008088.1-201ENST00000580993 280 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 Z99497.2-201ENST00000603634 310 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AL627309.6-201ENST00000606857 840 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 AC067747.1-201ENST00000608026 250 ntBASIC3.18□□□□□ -1.9
NPHP3Q7Z494 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC080128.1-201ENST00000474389 1917 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 Y_RNA.97-201ENST00000363094 102 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 RNU5A-2P-201ENST00000384337 116 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 SNORA41-201ENST00000384675 132 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 RNU6-1197P-201ENST00000391183 107 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 MIR1305-201ENST00000408300 86 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 RN7SKP32-201ENST00000410167 303 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 MORF4L1P6-201ENST00000418771 268 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC021382.1-201ENST00000483523 359 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 MTCO1P47-201ENST00000523889 1271 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC005951.1-201ENST00000576706 485 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 HSPE1P7-201ENST00000604681 321 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AL158211.4-201ENST00000606988 584 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC068057.2-201ENST00000624047 895 ntBASIC3.17□□□□□ -1.9
NPHP3Q7Z494 AC092447.10-201ENST00000620607 1652 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 PABPC1P9-201ENST00000426076 1612 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC005832.2-201ENST00000538921 1430 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 RNU6-114P-201ENST00000384704 105 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 SAR1AP2-201ENST00000392696 594 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 MIR1290-201ENST00000408735 78 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AL512286.1-201ENST00000439244 400 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 RPS27AP8-201ENST00000452665 445 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 SNORD121B-201ENST00000458838 81 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC010486.3-201ENST00000511602 785 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 CASP1P1-201ENST00000526345 212 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC068587.4-201ENST00000533893 186 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 MIR4307-201ENST00000582802 84 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 UBE2L4-201ENST00000587688 464 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AP000942.3-201ENST00000603702 160 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC121247.2-201ENST00000604776 136 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC004067.1-201ENST00000608733 700 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AL158801.5-201ENST00000623123 465 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC006927.3-201ENST00000638789 384 ntBASIC3.16□□□□□ -1.9
NPHP3Q7Z494 AC022336.2-201ENST00000568966 2538 ntBASIC3.15□□□□□ -1.9
NPHP3Q7Z494 AL445523.1-201ENST00000451184 1362 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.15□□□□□ -1.91
NPHP3Q7Z494 AC006378.2-201ENST00000623178 2476 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NPHP3Q7Z494 RNU6-501P-201ENST00000364072 100 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 RNU6-359P-201ENST00000365466 108 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 CD24P4-201ENST00000382840 243 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NPHP3Q7Z494 U8.14-201ENST00000390843 143 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 MTCYBP36-201ENST00000404146 440 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 AL021407.1-201ENST00000404531 386 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 AL162578.1-201ENST00000406202 378 ntBASIC3.15□□□□□ -1.91
NPHP3Q7Z494 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms