Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC107016.2-201ENST00000547968 190 ntBASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 AC103710.3-201ENST00000608157 948 ntBASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 AC103710.2-201ENST00000609912 942 ntBASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 PLCE1P1-201ENST00000622094 305 ntBASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRT28Q7Z3Y7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RNU6-76P-201ENST00000384060 104 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 Y_RNA.554-201ENST00000384672 102 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 MIR34A-201ENST00000385130 110 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RNU6-328P-201ENST00000390887 106 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 MRPL50P2-201ENST00000416821 482 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RPL21P66-201ENST00000426566 466 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 MTCO3P45-201ENST00000443036 613 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RPL23AP31-201ENST00000456160 467 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 RNU6-718P-201ENST00000516166 105 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AP001330.4-201ENST00000604350 154 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC012443.1-201ENST00000605605 231 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC090517.2-201ENST00000614966 680 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 SNHG22-203ENST00000617833 660 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AL359880.1-201ENST00000621879 266 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 AC007496.3-201ENST00000624987 3443 ntBASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
KRT28Q7Z3Y7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 RNA5SP189-201ENST00000364920 115 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 RNU4-12P-201ENST00000365233 139 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 Y_RNA.372-201ENST00000365599 102 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 MTCYBP5-201ENST00000423752 1135 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 DUTP6-201ENST00000425573 462 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 RPL23AP30-201ENST00000432419 501 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 UBE2V1P8-201ENST00000437166 265 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC010095.1-201ENST00000443543 144 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC079781.2-201ENST00000446424 169 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AL513124.1-201ENST00000450410 614 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 SNRPGP6-201ENST00000451124 220 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC003071.1-201ENST00000451219 789 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC009646.1-201ENST00000510455 318 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC005921.1-201ENST00000510589 286 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC011352.1-201ENST00000512300 793 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-410P-201ENST00000517006 107 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC090572.1-201ENST00000519251 160 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 HMGB1P41-201ENST00000520234 440 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 ARL2BPP2-201ENST00000550907 489 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 MIR4293-201ENST00000584305 78 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 GLUD1P4-201ENST00000590914 418 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC068944.2-201ENST00000610373 403 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AL360181.4-201ENST00000621752 134 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 AC009161.2-201ENST00000624626 138 ntBASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRT28Q7Z3Y7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 ELF2P3-201ENST00000445099 1506 ntBASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 GABPAP-201ENST00000419271 1356 ntBASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-600P-201ENST00000362524 99 ntBASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-39P-201ENST00000384344 107 ntBASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 CALM2P3-201ENST00000400429 449 ntBASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 AL136372.1-201ENST00000403060 228 ntBASIC3.95□□□□□ -1.78
KRT28Q7Z3Y7 BTF3P7-201ENST00000407097 488 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms