Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 Y_RNA.801-201ENST00000619005 101 ntBASIC3.61□□□□□ -1.83
SHC4Q6S5L8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 AL133216.2-202ENST00000634512 349 ntBASIC3.61□□□□□ -1.83
SHC4Q6S5L8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHC4Q6S5L8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RNU6-831P-201ENST00000384548 107 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RNU6-510P-201ENST00000391239 108 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RNU6-903P-201ENST00000391270 109 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 OR1AA1P-201ENST00000419597 916 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MED13P1-201ENST00000428342 171 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AL159987.2-201ENST00000432754 307 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 ERLEC1P1-201ENST00000433806 578 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 HMGB1P18-201ENST00000438801 619 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RPS12P18-201ENST00000442381 270 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AL118520.1-201ENST00000450770 291 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 Y_RNA.632-201ENST00000459189 102 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MRPS17P3-201ENST00000465453 385 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC105417.1-201ENST00000514691 285 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RNU4-29P-201ENST00000515943 174 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 IGKV2D-36-201ENST00000518643 226 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MIR4424-201ENST00000585257 86 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AL591516.1-201ENST00000611326 274 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AL365204.3-201ENST00000612448 685 ntBASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHC4Q6S5L8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 HSPE1P11-201ENST00000339579 310 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 RNU6-552P-201ENST00000362869 119 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 Y_RNA.162-201ENST00000363683 102 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 RNU6-339P-201ENST00000384310 107 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 UBE2V1P2-201ENST00000397758 440 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 TXNP7-201ENST00000406296 293 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 USP9YP20-201ENST00000419224 558 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 MTCO2P12-201ENST00000427426 682 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 OR2AS1P-201ENST00000427827 319 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 SAR1AP4-201ENST00000429225 591 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AC097713.2-201ENST00000430199 356 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AC005019.1-201ENST00000436455 431 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 CYCSP43-201ENST00000438233 310 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 MTND1P18-201ENST00000448191 573 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AC108059.3-201ENST00000456388 214 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 RPL37P6-202ENST00000464216 403 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 MTND4P17-201ENST00000470444 350 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 RN7SKP277-201ENST00000516895 283 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 RNU6-798P-201ENST00000516912 103 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AP000857.1-201ENST00000532151 543 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AL133271.1-201ENST00000538229 291 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 BNIP3P6-201ENST00000549284 499 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AL118558.2-201ENST00000556294 238 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AL133153.1-201ENST00000557756 303 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AC026464.5-201ENST00000562497 722 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AC007687.1-201ENST00000602704 304 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 AL136313.1-201ENST00000624804 202 ntBASIC3.59□□□□□ -1.83
SHC4Q6S5L8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC4Q6S5L8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms