Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SNORA23-201ENST00000365128 182 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 RNU6-637P-201ENST00000384050 107 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 RPL7P27-201ENST00000403775 720 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 SNORA11.2-201ENST00000408318 127 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 RNU4-26P-201ENST00000410270 107 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC098831.1-201ENST00000440661 216 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 MTND2P20-201ENST00000440805 661 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 SNORD121B-201ENST00000458838 81 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 RPL38P4-201ENST00000502376 214 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 MTCYBP16-201ENST00000509187 1129 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 SNORA31.6-201ENST00000516241 130 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 HMGN1P28-201ENST00000521340 364 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 NACAP3-201ENST00000552100 481 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 HIGD1AP17-201ENST00000554576 276 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC090897.2-201ENST00000581715 130 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC069294.1-201ENST00000608397 350 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC024257.5-201ENST00000612739 531 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AC243773.3-201ENST00000613270 256 ntBASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NIPAL1Q6NVV3 AP005901.5-201ENST00000545779 1796 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 SNORA63.3-201ENST00000362682 132 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 Y_RNA.234-201ENST00000364409 97 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 RN7SKP158-201ENST00000410453 326 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 NDUFS5P4-201ENST00000412983 318 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 USP9YP21-201ENST00000420603 432 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AC013262.1-201ENST00000426710 252 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AL160314.1-201ENST00000490836 438 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AC106872.3-201ENST00000495104 446 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 DEFB130C-202ENST00000530001 230 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 YWHAZP1-201ENST00000556286 722 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AL133241.1-201ENST00000556832 487 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AL391813.1-201ENST00000603098 260 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AC239868.4-201ENST00000608318 671 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AL138478.1-201ENST00000612252 832 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 AL138713.1-201ENST00000624026 2130 ntBASIC1.87□□□□□ -2.11
NIPAL1Q6NVV3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 RNU6-234P-201ENST00000365229 104 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 SNORA67.3-201ENST00000384366 140 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 RNU2-72P-201ENST00000411175 163 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AL139156.1-201ENST00000412785 841 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC019070.1-201ENST00000415008 1024 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 MTCYBP38-201ENST00000417160 1123 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC003685.2-201ENST00000422795 395 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC027124.2-201ENST00000428249 105 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC068781.1-201ENST00000488231 618 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 HMGB3P17-201ENST00000504195 649 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC107393.1-201ENST00000512403 346 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC112198.4-201ENST00000515450 351 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 SNORA31.23-201ENST00000517219 133 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC007375.1-201ENST00000554513 578 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 MIR5708-201ENST00000579723 85 ntBASIC1.86□□□□□ -2.11
NIPAL1Q6NVV3 AC024619.4-201ENST00000580924 316 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms