Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PTCRAQ6ISU1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCRAQ6ISU1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC005332.5-201ENST00000591222 2919 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 RNU6-78P-201ENST00000362897 107 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 RNU6-961P-201ENST00000363893 105 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SNORD116-14-201ENST00000383894 92 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SNORD116-17-201ENST00000383929 92 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SNORD116-15-201ENST00000384445 92 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SNORD116-20-201ENST00000384529 92 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SNORD116-19-201ENST00000384729 92 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 RPL23AP1-201ENST00000428990 471 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 COX6B1P7-201ENST00000430845 235 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 GEMIN8P3-201ENST00000445417 720 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AL354714.3-201ENST00000447284 493 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC005042.3-201ENST00000453230 174 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 snoU13.29-201ENST00000459370 104 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AL049874.1-201ENST00000489560 388 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC093840.1-201ENST00000511599 336 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 RNU6-1198P-201ENST00000516904 67 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC027369.5-201ENST00000533838 755 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AL391261.3-201ENST00000557194 520 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC233702.2-202ENST00000562547 291 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC022441.3-201ENST00000605737 136 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC010632.3-201ENST00000611377 369 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 MIR6716-201ENST00000613413 80 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PTCRAQ6ISU1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 Y_RNA.71-201ENST00000362892 104 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 RNU6-105P-201ENST00000363909 104 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 MIR539-201ENST00000365690 78 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 RNU6-1074P-201ENST00000383995 104 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 Y_RNA.412-201ENST00000384001 104 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 MIR329-1-201ENST00000385028 80 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 ELOCP19-201ENST00000411919 318 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 BX510359.2-201ENST00000417920 305 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC007560.1-201ENST00000426912 237 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 CYCSP32-201ENST00000440548 321 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AL078601.1-201ENST00000444542 271 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC092798.1-201ENST00000458542 409 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC010618.1-201ENST00000469924 477 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 RPL31P13-201ENST00000484151 370 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 ENPP7P9-201ENST00000514456 627 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 RNU7-121P-201ENST00000516604 62 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AL008718.3-201ENST00000610217 321 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCRAQ6ISU1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 AC018529.3-201ENST00000624212 2254 ntBASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 AC015813.6-201ENST00000624409 5808 ntBASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 FTLP6-201ENST00000355274 422 ntBASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 RNA5SP447-201ENST00000363749 119 ntBASIC5.27□□□□□ -1.57
PTCRAQ6ISU1 AL359837.1-201ENST00000381357 287 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms