Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 MIR3616-201ENST00000584070 92 ntBASIC1.23□□□□□ -2.21
NUP188Q5SRE5 MIR2909-201ENST00000617113 69 ntBASIC1.23□□□□□ -2.21
NUP188Q5SRE5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 RNU6-670P-201ENST00000364312 104 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 CIR1P3-201ENST00000405137 479 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AC092648.1-201ENST00000425870 423 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AC004941.2-201ENST00000427009 228 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AC097493.1-201ENST00000463958 372 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AL355812.1-201ENST00000603215 216 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
NUP188Q5SRE5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
NUP188Q5SRE5 HMGB3P31-201ENST00000413333 595 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AL356320.2-201ENST00000417263 507 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC093155.1-201ENST00000440164 826 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 ANKRD26P4-201ENST00000455755 950 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 EIF4EP3-201ENST00000498782 656 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC096751.1-202ENST00000502691 1067 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC087481.2-201ENST00000565492 330 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC012254.4-201ENST00000588843 273 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 XIAPP1-201ENST00000603162 600 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC106052.1-201ENST00000608029 497 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 UCA1.1-201ENST00000620952 75 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC008669.1-201ENST00000565823 2178 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 AC018630.2-201ENST00000534866 2403 ntBASIC1.21□□□□□ -2.22
NUP188Q5SRE5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
NUP188Q5SRE5 RNU6-1249P-201ENST00000363237 111 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 NUP35P2-201ENST00000416748 943 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC079780.1-201ENST00000428259 207 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 HSPE1P24-201ENST00000450782 238 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 DYNLL1P5-201ENST00000467158 270 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 RNU6-319P-201ENST00000516025 108 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC008676.3-201ENST00000521237 435 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC005498.1-201ENST00000592125 465 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL049737.1-201ENST00000413920 1403 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 DEFB108F-201ENST00000344638 222 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 RNU1-105P-201ENST00000363470 161 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 RNU6-837P-201ENST00000391056 108 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 RNU6-920P-201ENST00000410926 92 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 TATDN1P1-201ENST00000414123 891 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL358176.2-201ENST00000425769 204 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC016691.1-201ENST00000441321 413 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 DUXAP8-207ENST00000456786 622 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 CABYRP1-201ENST00000465493 1045 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL121769.1-201ENST00000469473 401 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP188Q5SRE5 AL109918.3-201ENST00000603072 338 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 FAM71BP1-201ENST00000604431 523 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 RMST_5.1-201ENST00000618704 126 ntBASIC1.2□□□□□ -2.22
NUP188Q5SRE5 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
NUP188Q5SRE5 RNU6-1251P-201ENST00000364502 107 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 RNA5SP450-201ENST00000411206 102 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AL133384.1-201ENST00000412744 351 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 MTCO3P4-201ENST00000419236 787 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP188Q5SRE5 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 snoU13.28-201ENST00000459235 104 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AC005410.1-202ENST00000460347 485 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 RPS27P26-201ENST00000494583 239 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AC104806.1-201ENST00000508720 308 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AC106900.2-201ENST00000604994 317 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 AC025263.3-201ENST00000622965 1396 ntBASIC1.19□□□□□ -2.22
NUP188Q5SRE5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 SFR1P1-201ENST00000403720 688 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AL356867.1-201ENST00000429623 299 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AC118469.1-201ENST00000442943 488 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AC107032.1-201ENST00000485945 480 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms