Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-428P-201ENST00000362942 107 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 SNORD73B-201ENST00000364394 72 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-821P-201ENST00000390995 107 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 BTF3L4P2-201ENST00000392798 346 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RN7SKP17-201ENST00000411242 351 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AL160275.2-201ENST00000412010 394 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC092447.6-201ENST00000414578 210 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RPL7AP25-201ENST00000423357 805 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RPL12P46-201ENST00000436610 195 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 LINC02210-201ENST00000444561 288 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC090804.1-201ENST00000448870 490 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 COX6B1P2-201ENST00000489624 230 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-840P-201ENST00000517275 65 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AP001328.1-201ENST00000528550 176 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AL391261.3-201ENST00000557194 520 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC022968.1-201ENST00000567372 442 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RN7SL356P-201ENST00000582228 248 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC234771.5-201ENST00000600161 514 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC068647.2-201ENST00000637380 353 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC000095.2-202ENST00000637415 154 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 AC009812.4-201ENST00000569134 1805 ntBASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
RNFT1Q5M7Z0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 SNORD14B-201ENST00000364533 90 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 RPS15AP5-201ENST00000436276 388 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC091912.1-201ENST00000511351 248 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-927P-201ENST00000516199 100 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 SCARNA20.4-201ENST00000516969 131 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC090877.1-201ENST00000561418 344 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 LARP7P3-201ENST00000579888 337 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC005296.1-201ENST00000616145 209 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC090617.7-201ENST00000623952 126 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 MIR3914-2-201ENST00000637339 95 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNFT1Q5M7Z0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-32P-201ENST00000383948 107 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-968P-201ENST00000384076 107 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-13P-201ENST00000384248 107 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 Y_RNA.495-201ENST00000384435 112 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 SNORD56.6-201ENST00000384569 71 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-146P-201ENST00000384602 108 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-12P-201ENST00000384604 107 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-41P-201ENST00000384741 107 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 MIR32-201ENST00000384965 70 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 SNORD37.2-201ENST00000391075 66 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 ENSAP1-201ENST00000392855 326 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AL133270.1-201ENST00000402635 279 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC016712.1-201ENST00000431088 378 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC092991.1-201ENST00000477176 376 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RPL23AP49-201ENST00000492925 468 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms