Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AL159972.1-201ENST00000625150 448 ntBASIC4.43□□□□□ -1.7
VPS72Q15906 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS72Q15906 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS72Q15906 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VPS72Q15906 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS72Q15906 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS72Q15906 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS72Q15906 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS72Q15906 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS72Q15906 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
VPS72Q15906 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS72Q15906 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS72Q15906 RNA5SP52-201ENST00000362448 134 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 RNU6-223P-201ENST00000362830 107 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 RNU6-1097P-201ENST00000363586 107 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 Y_RNA.157-201ENST00000363638 102 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 SNORD81.2-201ENST00000365153 76 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 RNU6-637P-201ENST00000384050 107 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS72Q15906 RNA5SP306-201ENST00000411087 107 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 PDCL2P1-201ENST00000419302 352 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS72Q15906 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AL139281.1-201ENST00000422120 335 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS72Q15906 TAAR7P-201ENST00000436141 242 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC007677.1-201ENST00000445757 515 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS72Q15906 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS72Q15906 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS72Q15906 MTCO2P29-201ENST00000465212 189 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS72Q15906 RPL23AP41-201ENST00000484754 458 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 RPS3AP50-201ENST00000487064 803 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS72Q15906 FGF7P4-201ENST00000509595 295 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 RNA5SP337-201ENST00000517007 109 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AP003072.2-201ENST00000527756 676 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 MIR3146-201ENST00000580367 79 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC060771.1-201ENST00000582031 164 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 UBE2L4-201ENST00000587688 464 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC013553.2-201ENST00000604244 589 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC015813.4-201ENST00000610469 179 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AL450472.3-201ENST00000615578 367 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 MIR6130-201ENST00000619419 109 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 FRG1KP-201ENST00000623592 341 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 AC112204.3-201ENST00000623822 332 ntBASIC4.42□□□□□ -1.7
VPS72Q15906 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS72Q15906 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS72Q15906 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS72Q15906 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS72Q15906 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS72Q15906 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS72Q15906 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS72Q15906 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS72Q15906 ZNF826P-207ENST00000622273 1910 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS72Q15906 Y_RNA.548-201ENST00000384656 105 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 MIR1-2-201ENST00000384961 85 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AP000567.1-201ENST00000406413 156 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 FAT1P1-201ENST00000406588 507 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 RNU6-373P-201ENST00000411247 98 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 RNU6-516P-201ENST00000411381 104 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS72Q15906 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS72Q15906 CBWD4P-201ENST00000445695 655 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 AC055855.1-201ENST00000489563 579 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS72Q15906 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS72Q15906 PCBP2P3-201ENST00000509726 843 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS72Q15906 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS72Q15906 SCARNA15.1-201ENST00000516384 125 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS72Q15906 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 AC243972.3-201ENST00000539655 198 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS72Q15906 HMGB1P6-201ENST00000569046 646 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS72Q15906 AC100810.6-201ENST00000638068 285 ntBASIC4.41□□□□□ -1.7
VPS72Q15906 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS72Q15906 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS72Q15906 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.4□□□□□ -1.7
VPS72Q15906 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
VPS72Q15906 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS72Q15906 RNA5SP42-201ENST00000364278 115 ntBASIC4.4□□□□□ -1.71
VPS72Q15906 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS72Q15906 LAP3P1-201ENST00000403648 294 ntBASIC4.4□□□□□ -1.71
VPS72Q15906 AL591416.1-201ENST00000404015 867 ntBASIC4.4□□□□□ -1.71
VPS72Q15906 AL356432.1-201ENST00000405809 419 ntBASIC4.4□□□□□ -1.71
VPS72Q15906 AL354719.1-201ENST00000406535 843 ntBASIC4.4□□□□□ -1.71
VPS72Q15906 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS72Q15906 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms