Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC092192.1-201ENST00000633154 1018 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.81□□□□□ -2.28
HMGN3Q15651 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.8□□□□□ -2.28
HMGN3Q15651 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN3Q15651 AL049714.1-201ENST00000466686 347 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.8□□□□□ -2.28
HMGN3Q15651 AC022447.1-201ENST00000515358 464 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.8□□□□□ -2.28
HMGN3Q15651 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGN3Q15651 IMMP1LP2-201ENST00000552954 492 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 RPL21P5-201ENST00000554662 472 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 AC087465.1-201ENST00000560574 245 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 AC022254.1-201ENST00000567857 235 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 AL031274.2-201ENST00000599419 203 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 DUXAP10-204ENST00000612052 616 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 FRG1HP-204ENST00000617940 757 ntBASIC0.8□□□□□ -2.28
HMGN3Q15651 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGN3Q15651 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGN3Q15651 RNU6-1155P-201ENST00000363554 107 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 RNU6-1083P-201ENST00000384022 107 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 MIR325-201ENST00000385260 98 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGN3Q15651 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN3Q15651 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN3Q15651 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN3Q15651 AC241584.1-201ENST00000438469 1241 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.79□□□□□ -2.28
HMGN3Q15651 HMGB1P36-201ENST00000487709 576 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN3Q15651 AC111193.1-201ENST00000504097 155 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN3Q15651 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.79□□□□□ -2.28
HMGN3Q15651 MIR4524B-201ENST00000581569 115 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 HMGN2P15-201ENST00000585707 270 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 HSPE1P19-201ENST00000603327 295 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 DUSP12P1-201ENST00000612874 516 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
HMGN3Q15651 U4atac.1-201ENST00000618345 95 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 AP003485.1-201ENST00000625093 753 ntBASIC0.79□□□□□ -2.28
HMGN3Q15651 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN3Q15651 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
HMGN3Q15651 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
HMGN3Q15651 Y_RNA.140-201ENST00000363474 103 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 RNU2-49P-201ENST00000410666 184 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC023141.4-201ENST00000412031 328 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC097499.1-201ENST00000444277 208 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC104058.1-201ENST00000448028 297 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 RNU6-775P-201ENST00000459318 96 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC104629.2-201ENST00000468627 598 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.78□□□□□ -2.28
HMGN3Q15651 CKS1BP2-201ENST00000497342 240 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGN3Q15651 AF213884.2-201ENST00000510417 903 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 LTV1P1-201ENST00000510683 1237 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 RNA5SP137-201ENST00000516833 135 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN3Q15651 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.78□□□□□ -2.28
HMGN3Q15651 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN3Q15651 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.78□□□□□ -2.28
HMGN3Q15651 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.78□□□□□ -2.28
HMGN3Q15651 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGN3Q15651 AL590410.1-201ENST00000617925 333 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 AC005858.4-201ENST00000623191 700 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 MIR7157-201ENST00000635801 60 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.78□□□□□ -2.28
HMGN3Q15651 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
HMGN3Q15651 RNU6-53P-201ENST00000365367 106 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 RNU6-98P-201ENST00000384173 107 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 RNU1-57P-201ENST00000384491 166 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 MIR1303-201ENST00000408625 86 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 RNU6-516P-201ENST00000411381 104 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AL365400.1-201ENST00000431854 640 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.77□□□□□ -2.29
HMGN3Q15651 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.77□□□□□ -2.29
HMGN3Q15651 AC233982.1-201ENST00000451247 436 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.77□□□□□ -2.29
HMGN3Q15651 RNA5SP57-201ENST00000459463 123 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC021382.1-201ENST00000483523 359 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
HMGN3Q15651 AC111000.5-201ENST00000506559 1178 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC067904.2-201ENST00000517322 1283 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.77□□□□□ -2.29
HMGN3Q15651 OR5B19P-201ENST00000531766 928 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC233702.2-202ENST00000562547 291 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC080078.3-201ENST00000605407 463 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC069294.1-201ENST00000608397 350 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AC012360.2-201ENST00000609349 391 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.77□□□□□ -2.29
HMGN3Q15651 AC040168.1-201ENST00000623594 991 ntBASIC0.77□□□□□ -2.29
HMGN3Q15651 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.77□□□□□ -2.29
HMGN3Q15651 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.77□□□□□ -2.29
HMGN3Q15651 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.77□□□□□ -2.29
HMGN3Q15651 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.77□□□□□ -2.29
HMGN3Q15651 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
HMGN3Q15651 AL161781.1-201ENST00000354277 403 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 SNORA25.8-201ENST00000364831 128 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 MIR518A2-201ENST00000384966 87 ntBASIC0.76□□□□□ -2.29
HMGN3Q15651 RNA5SP212-201ENST00000391223 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms